Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.34□□□□□ -0.43
Ptchd3Q0EEE2 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ptchd3Q0EEE2 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ptchd3Q0EEE2 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ptchd3Q0EEE2 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ptchd3Q0EEE2 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.34□□□□□ -0.43
Ptchd3Q0EEE2 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.34□□□□□ -0.43
Ptchd3Q0EEE2 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ptchd3Q0EEE2 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ptchd3Q0EEE2 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Ptchd3Q0EEE2 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ptchd3Q0EEE2 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.34□□□□□ -0.43
Ptchd3Q0EEE2 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.34□□□□□ -0.43
Ptchd3Q0EEE2 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ptchd3Q0EEE2 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ptchd3Q0EEE2 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ptchd3Q0EEE2 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ptchd3Q0EEE2 Gm28631-201ENSMUST00000190740 334 ntBASIC12.34□□□□□ -0.43
Ptchd3Q0EEE2 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.34□□□□□ -0.43
Ptchd3Q0EEE2 Gm19220-201ENSMUST00000222682 803 ntBASIC12.34□□□□□ -0.43
Ptchd3Q0EEE2 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.34□□□□□ -0.43
Ptchd3Q0EEE2 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ptchd3Q0EEE2 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.34□□□□□ -0.43
Ptchd3Q0EEE2 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ptchd3Q0EEE2 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ptchd3Q0EEE2 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ptchd3Q0EEE2 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ptchd3Q0EEE2 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ptchd3Q0EEE2 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ptchd3Q0EEE2 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ptchd3Q0EEE2 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Ptchd3Q0EEE2 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ptchd3Q0EEE2 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.34□□□□□ -0.43
Ptchd3Q0EEE2 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ptchd3Q0EEE2 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.34□□□□□ -0.43
Ptchd3Q0EEE2 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ptchd3Q0EEE2 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ptchd3Q0EEE2 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Ptchd3Q0EEE2 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ptchd3Q0EEE2 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ptchd3Q0EEE2 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ptchd3Q0EEE2 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ptchd3Q0EEE2 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ptchd3Q0EEE2 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.33□□□□□ -0.44
Ptchd3Q0EEE2 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ptchd3Q0EEE2 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ptchd3Q0EEE2 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.33□□□□□ -0.44
Ptchd3Q0EEE2 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.33□□□□□ -0.44
Ptchd3Q0EEE2 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ptchd3Q0EEE2 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Ptchd3Q0EEE2 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Ptchd3Q0EEE2 Gm29608-201ENSMUST00000190444 463 ntBASIC12.33□□□□□ -0.44
Ptchd3Q0EEE2 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ptchd3Q0EEE2 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.33□□□□□ -0.44
Ptchd3Q0EEE2 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.33□□□□□ -0.44
Ptchd3Q0EEE2 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ptchd3Q0EEE2 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ptchd3Q0EEE2 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ptchd3Q0EEE2 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ptchd3Q0EEE2 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.33□□□□□ -0.44
Ptchd3Q0EEE2 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ptchd3Q0EEE2 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ptchd3Q0EEE2 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ptchd3Q0EEE2 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.33□□□□□ -0.44
Ptchd3Q0EEE2 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.33□□□□□ -0.44
Ptchd3Q0EEE2 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ptchd3Q0EEE2 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ptchd3Q0EEE2 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ptchd3Q0EEE2 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ptchd3Q0EEE2 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.33□□□□□ -0.44
Ptchd3Q0EEE2 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.33□□□□□ -0.44
Ptchd3Q0EEE2 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Gm37917-201ENSMUST00000194711 392 ntBASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms