Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.82□□□□□ -0.2
Col9a2Q07643 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Col9a2Q07643 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col9a2Q07643 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col9a2Q07643 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Col9a2Q07643 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col9a2Q07643 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col9a2Q07643 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col9a2Q07643 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col9a2Q07643 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col9a2Q07643 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.82□□□□□ -0.2
Col9a2Q07643 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Col9a2Q07643 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col9a2Q07643 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col9a2Q07643 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.82□□□□□ -0.2
Col9a2Q07643 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col9a2Q07643 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a2Q07643 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.81□□□□□ -0.2
Col9a2Q07643 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a2Q07643 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a2Q07643 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a2Q07643 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a2Q07643 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Col9a2Q07643 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a2Q07643 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a2Q07643 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.81□□□□□ -0.2
Col9a2Q07643 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.81□□□□□ -0.2
Col9a2Q07643 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a2Q07643 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a2Q07643 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a2Q07643 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.81□□□□□ -0.2
Col9a2Q07643 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a2Q07643 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.81□□□□□ -0.2
Col9a2Q07643 Gm11930-201ENSMUST00000117788 190 ntBASIC13.81□□□□□ -0.2
Col9a2Q07643 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.81□□□□□ -0.2
Col9a2Q07643 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a2Q07643 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a2Q07643 Gm44262-201ENSMUST00000204969 372 ntBASIC13.81□□□□□ -0.2
Col9a2Q07643 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a2Q07643 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a2Q07643 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Col9a2Q07643 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a2Q07643 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.81□□□□□ -0.2
Col9a2Q07643 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a2Q07643 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a2Q07643 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a2Q07643 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.81□□□□□ -0.2
Col9a2Q07643 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.81□□□□□ -0.2
Col9a2Q07643 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a2Q07643 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a2Q07643 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a2Q07643 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a2Q07643 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
Col9a2Q07643 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Col9a2Q07643 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a2Q07643 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a2Q07643 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.8□□□□□ -0.2
Col9a2Q07643 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.8□□□□□ -0.2
Col9a2Q07643 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a2Q07643 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.8□□□□□ -0.2
Col9a2Q07643 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a2Q07643 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a2Q07643 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a2Q07643 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a2Q07643 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a2Q07643 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Col9a2Q07643 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.8□□□□□ -0.2
Col9a2Q07643 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a2Q07643 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a2Q07643 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a2Q07643 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a2Q07643 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a2Q07643 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.8□□□□□ -0.2
Col9a2Q07643 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a2Q07643 Mir433-201ENSMUST00000093564 124 ntBASIC13.8□□□□□ -0.2
Col9a2Q07643 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a2Q07643 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a2Q07643 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a2Q07643 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a2Q07643 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a2Q07643 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.8□□□□□ -0.2
Col9a2Q07643 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a2Q07643 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a2Q07643 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a2Q07643 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a2Q07643 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Col9a2Q07643 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a2Q07643 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a2Q07643 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Col9a2Q07643 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a2Q07643 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a2Q07643 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a2Q07643 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a2Q07643 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col9a2Q07643 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col9a2Q07643 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col9a2Q07643 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.79□□□□□ -0.2
Col9a2Q07643 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col9a2Q07643 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col9a2Q07643 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms