Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Thbs3Q05895 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Thbs3Q05895 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.23□□□□□ -0.61
Thbs3Q05895 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Thbs3Q05895 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.23□□□□□ -0.61
Thbs3Q05895 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Thbs3Q05895 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Thbs3Q05895 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.23□□□□□ -0.61
Thbs3Q05895 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Thbs3Q05895 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.23□□□□□ -0.61
Thbs3Q05895 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Thbs3Q05895 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Thbs3Q05895 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Thbs3Q05895 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Thbs3Q05895 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Thbs3Q05895 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Thbs3Q05895 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Thbs3Q05895 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.23□□□□□ -0.61
Thbs3Q05895 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.23□□□□□ -0.61
Thbs3Q05895 Gm13226-201ENSMUST00000117838 404 ntBASIC11.23□□□□□ -0.61
Thbs3Q05895 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.23□□□□□ -0.61
Thbs3Q05895 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Thbs3Q05895 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.23□□□□□ -0.61
Thbs3Q05895 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.23□□□□□ -0.61
Thbs3Q05895 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.23□□□□□ -0.61
Thbs3Q05895 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.23□□□□□ -0.61
Thbs3Q05895 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.23□□□□□ -0.61
Thbs3Q05895 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Thbs3Q05895 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Thbs3Q05895 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Thbs3Q05895 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.23□□□□□ -0.61
Thbs3Q05895 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Thbs3Q05895 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Thbs3Q05895 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Thbs3Q05895 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Thbs3Q05895 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Thbs3Q05895 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Thbs3Q05895 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Thbs3Q05895 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Thbs3Q05895 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.23□□□□□ -0.61
Thbs3Q05895 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Thbs3Q05895 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Thbs3Q05895 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Thbs3Q05895 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Thbs3Q05895 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Thbs3Q05895 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Thbs3Q05895 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
Thbs3Q05895 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Thbs3Q05895 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Thbs3Q05895 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Thbs3Q05895 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Thbs3Q05895 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Thbs3Q05895 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Thbs3Q05895 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Thbs3Q05895 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Thbs3Q05895 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Thbs3Q05895 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Thbs3Q05895 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Thbs3Q05895 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Thbs3Q05895 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Thbs3Q05895 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Thbs3Q05895 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Thbs3Q05895 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Thbs3Q05895 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Thbs3Q05895 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Thbs3Q05895 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Thbs3Q05895 Gm14660-201ENSMUST00000119809 575 ntBASIC11.22□□□□□ -0.61
Thbs3Q05895 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.22□□□□□ -0.61
Thbs3Q05895 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.22□□□□□ -0.61
Thbs3Q05895 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Thbs3Q05895 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.22□□□□□ -0.61
Thbs3Q05895 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.22□□□□□ -0.61
Thbs3Q05895 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Thbs3Q05895 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.22□□□□□ -0.61
Thbs3Q05895 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.22□□□□□ -0.61
Thbs3Q05895 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.22□□□□□ -0.61
Thbs3Q05895 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.22□□□□□ -0.61
Thbs3Q05895 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Thbs3Q05895 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.22□□□□□ -0.61
Thbs3Q05895 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Thbs3Q05895 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.22□□□□□ -0.61
Thbs3Q05895 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Thbs3Q05895 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Thbs3Q05895 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Thbs3Q05895 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Thbs3Q05895 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Thbs3Q05895 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Thbs3Q05895 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Thbs3Q05895 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Thbs3Q05895 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Thbs3Q05895 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Thbs3Q05895 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Thbs3Q05895 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Thbs3Q05895 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Thbs3Q05895 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
Thbs3Q05895 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Thbs3Q05895 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Thbs3Q05895 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Thbs3Q05895 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Thbs3Q05895 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms