Protein–RNA interactions for Protein: Q04519

Smpd1, Sphingomyelin phosphodiesterase, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smpd1Q04519 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.73□□□□□ -0.21
Smpd1Q04519 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smpd1Q04519 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smpd1Q04519 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smpd1Q04519 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Smpd1Q04519 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smpd1Q04519 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smpd1Q04519 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smpd1Q04519 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smpd1Q04519 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smpd1Q04519 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smpd1Q04519 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.72□□□□□ -0.21
Smpd1Q04519 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smpd1Q04519 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.72□□□□□ -0.21
Smpd1Q04519 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.72□□□□□ -0.21
Smpd1Q04519 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smpd1Q04519 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smpd1Q04519 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smpd1Q04519 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.72□□□□□ -0.21
Smpd1Q04519 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smpd1Q04519 Gm24241-201ENSMUST00000157787 145 ntBASIC13.72□□□□□ -0.21
Smpd1Q04519 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smpd1Q04519 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smpd1Q04519 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Smpd1Q04519 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smpd1Q04519 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Smpd1Q04519 Mir5132-201ENSMUST00000175166 71 ntBASIC13.72□□□□□ -0.21
Smpd1Q04519 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smpd1Q04519 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC13.72□□□□□ -0.21
Smpd1Q04519 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC13.72□□□□□ -0.21
Smpd1Q04519 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smpd1Q04519 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC13.72□□□□□ -0.21
Smpd1Q04519 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC13.72□□□□□ -0.21
Smpd1Q04519 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.72□□□□□ -0.21
Smpd1Q04519 Gm44967-201ENSMUST00000207047 631 ntBASIC13.72□□□□□ -0.21
Smpd1Q04519 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smpd1Q04519 Manf-201ENSMUST00000069036 960 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smpd1Q04519 Desi2-202ENSMUST00000069568 1193 ntBASIC13.72□□□□□ -0.21
Smpd1Q04519 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smpd1Q04519 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Smpd1Q04519 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smpd1Q04519 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.72□□□□□ -0.21
Smpd1Q04519 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smpd1Q04519 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smpd1Q04519 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
Smpd1Q04519 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smpd1Q04519 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Smpd1Q04519 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smpd1Q04519 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smpd1Q04519 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC13.72□□□□□ -0.21
Smpd1Q04519 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.71□□□□□ -0.21
Smpd1Q04519 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smpd1Q04519 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Smpd1Q04519 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Smpd1Q04519 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.71□□□□□ -0.21
Smpd1Q04519 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Smpd1Q04519 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smpd1Q04519 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smpd1Q04519 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smpd1Q04519 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Smpd1Q04519 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.71□□□□□ -0.21
Smpd1Q04519 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC13.71□□□□□ -0.21
Smpd1Q04519 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Smpd1Q04519 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smpd1Q04519 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.21
Smpd1Q04519 Gm16285-201ENSMUST00000162999 347 ntBASIC13.71□□□□□ -0.21
Smpd1Q04519 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Smpd1Q04519 Gm10012-202ENSMUST00000170379 372 ntBASIC13.71□□□□□ -0.21
Smpd1Q04519 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.71□□□□□ -0.21
Smpd1Q04519 Mir7070-201ENSMUST00000183657 86 ntBASIC13.71□□□□□ -0.21
Smpd1Q04519 Gm44061-201ENSMUST00000203962 1195 ntBASIC13.71□□□□□ -0.21
Smpd1Q04519 AL929555.1-201ENSMUST00000215283 509 ntBASIC13.71□□□□□ -0.21
Smpd1Q04519 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC13.71□□□□□ -0.21
Smpd1Q04519 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Smpd1Q04519 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.71□□□□□ -0.21
Smpd1Q04519 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smpd1Q04519 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Smpd1Q04519 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smpd1Q04519 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smpd1Q04519 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Smpd1Q04519 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smpd1Q04519 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smpd1Q04519 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smpd1Q04519 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smpd1Q04519 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.71□□□□□ -0.22
Smpd1Q04519 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Smpd1Q04519 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.71□□□□□ -0.22
Smpd1Q04519 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smpd1Q04519 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.71□□□□□ -0.22
Smpd1Q04519 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smpd1Q04519 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Smpd1Q04519 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smpd1Q04519 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smpd1Q04519 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smpd1Q04519 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smpd1Q04519 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.7□□□□□ -0.22
Smpd1Q04519 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smpd1Q04519 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smpd1Q04519 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smpd1Q04519 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms