Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
GabpaQ00422 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
GabpaQ00422 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
GabpaQ00422 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
GabpaQ00422 Gm24845-201ENSMUST00000158034 109 ntBASIC14.48□□□□□ -0.09
GabpaQ00422 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC14.48□□□□□ -0.09
GabpaQ00422 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GabpaQ00422 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
GabpaQ00422 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GabpaQ00422 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.48□□□□□ -0.09
GabpaQ00422 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
GabpaQ00422 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
GabpaQ00422 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GabpaQ00422 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GabpaQ00422 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GabpaQ00422 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
GabpaQ00422 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GabpaQ00422 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GabpaQ00422 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GabpaQ00422 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
GabpaQ00422 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GabpaQ00422 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GabpaQ00422 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GabpaQ00422 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GabpaQ00422 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
GabpaQ00422 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GabpaQ00422 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GabpaQ00422 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GabpaQ00422 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
GabpaQ00422 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GabpaQ00422 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GabpaQ00422 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
GabpaQ00422 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
GabpaQ00422 Gm15703-201ENSMUST00000120250 880 ntBASIC14.47□□□□□ -0.09
GabpaQ00422 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.47□□□□□ -0.09
GabpaQ00422 Gm24990-201ENSMUST00000157406 323 ntBASIC14.47□□□□□ -0.09
GabpaQ00422 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
GabpaQ00422 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GabpaQ00422 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GabpaQ00422 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
GabpaQ00422 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GabpaQ00422 Gm9678-201ENSMUST00000198979 1149 ntBASIC14.47□□□□□ -0.09
GabpaQ00422 AC161537.1-201ENSMUST00000226199 1015 ntBASIC14.47□□□□□ -0.09
GabpaQ00422 Mettl6-204ENSMUST00000227595 1027 ntBASIC14.47□□□□□ -0.09
GabpaQ00422 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GabpaQ00422 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GabpaQ00422 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GabpaQ00422 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GabpaQ00422 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GabpaQ00422 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GabpaQ00422 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GabpaQ00422 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GabpaQ00422 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
GabpaQ00422 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
GabpaQ00422 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
GabpaQ00422 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
GabpaQ00422 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GabpaQ00422 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
GabpaQ00422 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.46□□□□□ -0.09
GabpaQ00422 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
GabpaQ00422 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.46□□□□□ -0.09
GabpaQ00422 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GabpaQ00422 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GabpaQ00422 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
GabpaQ00422 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GabpaQ00422 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
GabpaQ00422 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GabpaQ00422 Gm14130-201ENSMUST00000118417 987 ntBASIC14.46□□□□□ -0.09
GabpaQ00422 Gm14832-201ENSMUST00000121289 322 ntBASIC14.46□□□□□ -0.09
GabpaQ00422 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GabpaQ00422 Gm2260-201ENSMUST00000184965 657 ntBASIC14.46□□□□□ -0.09
GabpaQ00422 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GabpaQ00422 Gm39404-201ENSMUST00000216350 313 ntBASIC14.46□□□□□ -0.09
GabpaQ00422 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GabpaQ00422 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.46□□□□□ -0.09
GabpaQ00422 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
GabpaQ00422 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.45□□□□□ -0.1
GabpaQ00422 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GabpaQ00422 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.45□□□□□ -0.1
GabpaQ00422 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GabpaQ00422 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
GabpaQ00422 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GabpaQ00422 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
GabpaQ00422 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
GabpaQ00422 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GabpaQ00422 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
GabpaQ00422 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GabpaQ00422 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GabpaQ00422 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GabpaQ00422 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC14.45□□□□□ -0.1
GabpaQ00422 Gm13315-201ENSMUST00000120376 991 ntBASIC14.45□□□□□ -0.1
GabpaQ00422 Gm14999-201ENSMUST00000121039 624 ntBASIC14.45□□□□□ -0.1
GabpaQ00422 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.45□□□□□ -0.1
GabpaQ00422 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GabpaQ00422 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GabpaQ00422 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
GabpaQ00422 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC14.45□□□□□ -0.1
GabpaQ00422 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.45□□□□□ -0.1
GabpaQ00422 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GabpaQ00422 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms