Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Thumpd3P97770 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Thumpd3P97770 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Thumpd3P97770 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Thumpd3P97770 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Thumpd3P97770 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Thumpd3P97770 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Thumpd3P97770 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Thumpd3P97770 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Thumpd3P97770 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Thumpd3P97770 Gm15376-201ENSMUST00000122258 783 ntBASIC13.02□□□□□ -0.33
Thumpd3P97770 Gm29608-201ENSMUST00000190444 463 ntBASIC13.02□□□□□ -0.33
Thumpd3P97770 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.02□□□□□ -0.33
Thumpd3P97770 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Thumpd3P97770 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.02□□□□□ -0.33
Thumpd3P97770 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Thumpd3P97770 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Thumpd3P97770 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Thumpd3P97770 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Thumpd3P97770 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Thumpd3P97770 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Thumpd3P97770 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Thumpd3P97770 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Thumpd3P97770 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Thumpd3P97770 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Thumpd3P97770 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.02□□□□□ -0.33
Thumpd3P97770 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.02□□□□□ -0.33
Thumpd3P97770 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Thumpd3P97770 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Thumpd3P97770 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Thumpd3P97770 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Thumpd3P97770 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.02□□□□□ -0.33
Thumpd3P97770 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Thumpd3P97770 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd3P97770 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.01□□□□□ -0.33
Thumpd3P97770 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd3P97770 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd3P97770 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd3P97770 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd3P97770 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd3P97770 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd3P97770 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd3P97770 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd3P97770 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd3P97770 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd3P97770 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd3P97770 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd3P97770 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.01□□□□□ -0.33
Thumpd3P97770 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.01□□□□□ -0.33
Thumpd3P97770 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd3P97770 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.01□□□□□ -0.33
Thumpd3P97770 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd3P97770 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd3P97770 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.01□□□□□ -0.33
Thumpd3P97770 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.01□□□□□ -0.33
Thumpd3P97770 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.01□□□□□ -0.33
Thumpd3P97770 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd3P97770 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd3P97770 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Thumpd3P97770 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd3P97770 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd3P97770 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd3P97770 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.01□□□□□ -0.33
Thumpd3P97770 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Thumpd3P97770 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd3P97770 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.01□□□□□ -0.33
Thumpd3P97770 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd3P97770 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd3P97770 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Thumpd3P97770 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd3P97770 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.01□□□□□ -0.33
Thumpd3P97770 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd3P97770 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd3P97770 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd3P97770 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13□□□□□ -0.33
Thumpd3P97770 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Thumpd3P97770 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13□□□□□ -0.33
Thumpd3P97770 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Thumpd3P97770 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13□□□□□ -0.33
Thumpd3P97770 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Thumpd3P97770 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Thumpd3P97770 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Thumpd3P97770 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Thumpd3P97770 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13□□□□□ -0.33
Thumpd3P97770 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Thumpd3P97770 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Thumpd3P97770 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Thumpd3P97770 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Thumpd3P97770 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Thumpd3P97770 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Thumpd3P97770 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Thumpd3P97770 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13□□□□□ -0.33
Thumpd3P97770 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13□□□□□ -0.33
Thumpd3P97770 Gm26464-201ENSMUST00000157094 305 ntBASIC13□□□□□ -0.33
Thumpd3P97770 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13□□□□□ -0.33
Thumpd3P97770 Gm27486-201ENSMUST00000184923 80 ntBASIC13□□□□□ -0.33
Thumpd3P97770 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Thumpd3P97770 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Thumpd3P97770 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Thumpd3P97770 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms