Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx3-2P97503 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Nkx3-2P97503 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.11□□□□□ -0.47
Nkx3-2P97503 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx3-2P97503 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx3-2P97503 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx3-2P97503 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx3-2P97503 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx3-2P97503 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx3-2P97503 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx3-2P97503 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx3-2P97503 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx3-2P97503 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Nkx3-2P97503 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx3-2P97503 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx3-2P97503 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.11□□□□□ -0.47
Nkx3-2P97503 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx3-2P97503 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Nkx3-2P97503 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx3-2P97503 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx3-2P97503 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Nkx3-2P97503 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx3-2P97503 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx3-2P97503 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Nkx3-2P97503 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.1□□□□□ -0.47
Nkx3-2P97503 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx3-2P97503 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.1□□□□□ -0.47
Nkx3-2P97503 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx3-2P97503 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.1□□□□□ -0.47
Nkx3-2P97503 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.1□□□□□ -0.47
Nkx3-2P97503 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx3-2P97503 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.1□□□□□ -0.47
Nkx3-2P97503 Gm12363-201ENSMUST00000122250 668 ntBASIC12.1□□□□□ -0.47
Nkx3-2P97503 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.1□□□□□ -0.47
Nkx3-2P97503 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx3-2P97503 Gm6222-202ENSMUST00000182143 629 ntBASIC12.1□□□□□ -0.47
Nkx3-2P97503 Olfr284-202ENSMUST00000206647 966 ntBASIC12.1□□□□□ -0.47
Nkx3-2P97503 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.1□□□□□ -0.47
Nkx3-2P97503 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.1□□□□□ -0.47
Nkx3-2P97503 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx3-2P97503 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.1□□□□□ -0.47
Nkx3-2P97503 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Nkx3-2P97503 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Nkx3-2P97503 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Nkx3-2P97503 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Nkx3-2P97503 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx3-2P97503 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx3-2P97503 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.1□□□□□ -0.47
Nkx3-2P97503 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx3-2P97503 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx3-2P97503 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Nkx3-2P97503 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx3-2P97503 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.1□□□□□ -0.47
Nkx3-2P97503 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Nkx3-2P97503 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx3-2P97503 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Nkx3-2P97503 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx3-2P97503 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx3-2P97503 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx3-2P97503 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Nkx3-2P97503 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx3-2P97503 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx3-2P97503 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.09□□□□□ -0.47
Nkx3-2P97503 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx3-2P97503 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx3-2P97503 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx3-2P97503 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx3-2P97503 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx3-2P97503 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx3-2P97503 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Nkx3-2P97503 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx3-2P97503 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx3-2P97503 Mir874-201ENSMUST00000104769 76 ntBASIC12.09□□□□□ -0.47
Nkx3-2P97503 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx3-2P97503 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Nkx3-2P97503 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.09□□□□□ -0.47
Nkx3-2P97503 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.09□□□□□ -0.47
Nkx3-2P97503 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.09□□□□□ -0.47
Nkx3-2P97503 Mir8109-201ENSMUST00000184375 117 ntBASIC12.09□□□□□ -0.47
Nkx3-2P97503 Gm29396-201ENSMUST00000185659 716 ntBASIC12.09□□□□□ -0.47
Nkx3-2P97503 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx3-2P97503 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.09□□□□□ -0.47
Nkx3-2P97503 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.09□□□□□ -0.47
Nkx3-2P97503 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.09□□□□□ -0.47
Nkx3-2P97503 Gm18584-201ENSMUST00000203098 964 ntBASIC12.09□□□□□ -0.47
Nkx3-2P97503 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.09□□□□□ -0.47
Nkx3-2P97503 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.09□□□□□ -0.47
Nkx3-2P97503 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.09□□□□□ -0.47
Nkx3-2P97503 Gm5781-201ENSMUST00000219792 443 ntBASIC12.09□□□□□ -0.47
Nkx3-2P97503 Gm9257-201ENSMUST00000221254 232 ntBASIC12.09□□□□□ -0.47
Nkx3-2P97503 Gm45930-201ENSMUST00000221330 292 ntBASIC12.09□□□□□ -0.47
Nkx3-2P97503 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Nkx3-2P97503 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Nkx3-2P97503 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx3-2P97503 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx3-2P97503 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.09□□□□□ -0.47
Nkx3-2P97503 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx3-2P97503 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.09□□□□□ -0.47
Nkx3-2P97503 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Nkx3-2P97503 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms