Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Npas1P97459 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Npas1P97459 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.74□□□□□ -0.69
Npas1P97459 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Npas1P97459 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Npas1P97459 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Npas1P97459 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Npas1P97459 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Npas1P97459 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Npas1P97459 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Npas1P97459 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Npas1P97459 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Npas1P97459 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Npas1P97459 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Npas1P97459 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Npas1P97459 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
Npas1P97459 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.73□□□□□ -0.69
Npas1P97459 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Npas1P97459 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Npas1P97459 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Npas1P97459 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Npas1P97459 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Npas1P97459 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Npas1P97459 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
Npas1P97459 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Npas1P97459 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Npas1P97459 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Npas1P97459 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Npas1P97459 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Npas1P97459 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Npas1P97459 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Npas1P97459 Gm14822-201ENSMUST00000122247 291 ntBASIC10.73□□□□□ -0.69
Npas1P97459 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Npas1P97459 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC10.73□□□□□ -0.69
Npas1P97459 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Npas1P97459 Gm25948-201ENSMUST00000175334 112 ntBASIC10.73□□□□□ -0.69
Npas1P97459 Gm24420-201ENSMUST00000176676 59 ntBASIC10.73□□□□□ -0.69
Npas1P97459 Gm43703-201ENSMUST00000200523 763 ntBASIC10.73□□□□□ -0.69
Npas1P97459 Gm45841-201ENSMUST00000207700 164 ntBASIC10.73□□□□□ -0.69
Npas1P97459 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Npas1P97459 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Npas1P97459 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Npas1P97459 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Npas1P97459 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Npas1P97459 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Npas1P97459 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Npas1P97459 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
Npas1P97459 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Npas1P97459 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Npas1P97459 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Npas1P97459 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Npas1P97459 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC10.73□□□□□ -0.69
Npas1P97459 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Npas1P97459 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Npas1P97459 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Npas1P97459 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Npas1P97459 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Npas1P97459 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Npas1P97459 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Npas1P97459 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Npas1P97459 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Npas1P97459 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Npas1P97459 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Npas1P97459 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Npas1P97459 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.72□□□□□ -0.69
Npas1P97459 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Npas1P97459 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Npas1P97459 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.72□□□□□ -0.69
Npas1P97459 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Npas1P97459 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Npas1P97459 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Npas1P97459 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Npas1P97459 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Npas1P97459 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Npas1P97459 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Npas1P97459 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Npas1P97459 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Npas1P97459 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC10.72□□□□□ -0.69
Npas1P97459 Gm15240-201ENSMUST00000118156 720 ntBASIC10.72□□□□□ -0.69
Npas1P97459 Gm4804-201ENSMUST00000182234 999 ntBASIC10.72□□□□□ -0.69
Npas1P97459 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Npas1P97459 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Npas1P97459 Gm44771-201ENSMUST00000206975 626 ntBASIC10.72□□□□□ -0.69
Npas1P97459 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC10.72□□□□□ -0.69
Npas1P97459 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Npas1P97459 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Npas1P97459 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Npas1P97459 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Npas1P97459 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Npas1P97459 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.72□□□□□ -0.69
Npas1P97459 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Npas1P97459 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Npas1P97459 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Npas1P97459 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Npas1P97459 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Npas1P97459 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Npas1P97459 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Npas1P97459 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Npas1P97459 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Npas1P97459 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms