Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CiitaP79621 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CiitaP79621 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CiitaP79621 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CiitaP79621 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CiitaP79621 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CiitaP79621 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.83□□□□□ -0.2
CiitaP79621 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CiitaP79621 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CiitaP79621 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.83□□□□□ -0.2
CiitaP79621 Gm14381-201ENSMUST00000122105 414 ntBASIC13.83□□□□□ -0.2
CiitaP79621 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
CiitaP79621 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CiitaP79621 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CiitaP79621 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.83□□□□□ -0.2
CiitaP79621 Gm4857-201ENSMUST00000192718 785 ntBASIC13.83□□□□□ -0.2
CiitaP79621 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CiitaP79621 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.83□□□□□ -0.2
CiitaP79621 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CiitaP79621 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.83□□□□□ -0.2
CiitaP79621 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CiitaP79621 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CiitaP79621 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.83□□□□□ -0.2
CiitaP79621 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.83□□□□□ -0.2
CiitaP79621 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CiitaP79621 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CiitaP79621 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CiitaP79621 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CiitaP79621 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CiitaP79621 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CiitaP79621 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CiitaP79621 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CiitaP79621 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CiitaP79621 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CiitaP79621 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CiitaP79621 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CiitaP79621 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
CiitaP79621 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CiitaP79621 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
CiitaP79621 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CiitaP79621 Gm20482-202ENSMUST00000174729 825 ntBASIC13.82□□□□□ -0.2
CiitaP79621 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CiitaP79621 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CiitaP79621 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.82□□□□□ -0.2
CiitaP79621 CT009713.10-202ENSMUST00000225734 696 ntBASIC13.82□□□□□ -0.2
CiitaP79621 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.82□□□□□ -0.2
CiitaP79621 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.82□□□□□ -0.2
CiitaP79621 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CiitaP79621 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CiitaP79621 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CiitaP79621 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CiitaP79621 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CiitaP79621 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CiitaP79621 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CiitaP79621 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CiitaP79621 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CiitaP79621 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CiitaP79621 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CiitaP79621 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.82□□□□□ -0.2
CiitaP79621 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CiitaP79621 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CiitaP79621 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CiitaP79621 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.81□□□□□ -0.2
CiitaP79621 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CiitaP79621 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CiitaP79621 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CiitaP79621 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
CiitaP79621 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.81□□□□□ -0.2
CiitaP79621 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CiitaP79621 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CiitaP79621 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CiitaP79621 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.81□□□□□ -0.2
CiitaP79621 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CiitaP79621 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CiitaP79621 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CiitaP79621 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CiitaP79621 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CiitaP79621 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CiitaP79621 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CiitaP79621 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CiitaP79621 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.81□□□□□ -0.2
CiitaP79621 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CiitaP79621 Gm25043-201ENSMUST00000158604 212 ntBASIC13.81□□□□□ -0.2
CiitaP79621 Gm26956-201ENSMUST00000182176 986 ntBASIC13.81□□□□□ -0.2
CiitaP79621 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.81□□□□□ -0.2
CiitaP79621 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CiitaP79621 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
CiitaP79621 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CiitaP79621 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CiitaP79621 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.81□□□□□ -0.2
CiitaP79621 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CiitaP79621 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CiitaP79621 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.81□□□□□ -0.2
CiitaP79621 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CiitaP79621 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CiitaP79621 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CiitaP79621 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CiitaP79621 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CiitaP79621 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CiitaP79621 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms