Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm5P62322 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm5P62322 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC10.62□□□□□ -0.71
Lsm5P62322 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC10.62□□□□□ -0.71
Lsm5P62322 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Lsm5P62322 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Lsm5P62322 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC10.62□□□□□ -0.71
Lsm5P62322 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC10.62□□□□□ -0.71
Lsm5P62322 Gm43125-201ENSMUST00000201724 730 ntBASIC10.62□□□□□ -0.71
Lsm5P62322 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC10.62□□□□□ -0.71
Lsm5P62322 Gm45683-201ENSMUST00000210825 1247 ntBASIC10.62□□□□□ -0.71
Lsm5P62322 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC10.62□□□□□ -0.71
Lsm5P62322 AC154305.4-201ENSMUST00000224520 614 ntBASIC10.62□□□□□ -0.71
Lsm5P62322 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm5P62322 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm5P62322 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm5P62322 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm5P62322 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC10.62□□□□□ -0.71
Lsm5P62322 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Lsm5P62322 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm5P62322 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm5P62322 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
Lsm5P62322 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm5P62322 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.62□□□□□ -0.71
Lsm5P62322 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm5P62322 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC10.62□□□□□ -0.71
Lsm5P62322 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm5P62322 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm5P62322 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm5P62322 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm5P62322 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm5P62322 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm5P62322 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Lsm5P62322 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm5P62322 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm5P62322 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm5P62322 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC10.61□□□□□ -0.71
Lsm5P62322 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm5P62322 Dopey2-207ENSMUST00000227156 7340 ntBASIC10.61□□□□□ -0.71
Lsm5P62322 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm5P62322 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm5P62322 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm5P62322 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm5P62322 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm5P62322 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.61□□□□□ -0.71
Lsm5P62322 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm5P62322 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm5P62322 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm5P62322 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm5P62322 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm5P62322 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC10.61□□□□□ -0.71
Lsm5P62322 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Lsm5P62322 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm5P62322 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.61□□□□□ -0.71
Lsm5P62322 Gm13365-201ENSMUST00000121188 973 ntBASIC10.61□□□□□ -0.71
Lsm5P62322 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
Lsm5P62322 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC10.61□□□□□ -0.71
Lsm5P62322 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC10.61□□□□□ -0.71
Lsm5P62322 Gm27494-201ENSMUST00000184735 189 ntBASIC10.61□□□□□ -0.71
Lsm5P62322 Gm18905-201ENSMUST00000205454 928 ntBASIC10.61□□□□□ -0.71
Lsm5P62322 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC10.61□□□□□ -0.71
Lsm5P62322 Gm17870-201ENSMUST00000219489 1174 ntBASIC10.61□□□□□ -0.71
Lsm5P62322 Shd-206ENSMUST00000225145 998 ntBASIC10.61□□□□□ -0.71
Lsm5P62322 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm5P62322 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm5P62322 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm5P62322 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC10.61□□□□□ -0.71
Lsm5P62322 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm5P62322 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm5P62322 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Lsm5P62322 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm5P62322 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm5P62322 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Lsm5P62322 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Lsm5P62322 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm5P62322 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm5P62322 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm5P62322 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm5P62322 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm5P62322 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm5P62322 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm5P62322 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm5P62322 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm5P62322 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm5P62322 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm5P62322 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.61□□□□□ -0.71
Lsm5P62322 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm5P62322 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm5P62322 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm5P62322 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm5P62322 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm5P62322 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm5P62322 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm5P62322 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.6□□□□□ -0.71
Lsm5P62322 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm5P62322 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm5P62322 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm5P62322 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm5P62322 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm5P62322 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms