Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm6P62313 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm6P62313 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lsm6P62313 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lsm6P62313 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lsm6P62313 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lsm6P62313 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lsm6P62313 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lsm6P62313 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lsm6P62313 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.23□□□□□ -0.61
Lsm6P62313 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lsm6P62313 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lsm6P62313 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Lsm6P62313 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lsm6P62313 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lsm6P62313 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lsm6P62313 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lsm6P62313 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Lsm6P62313 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.23□□□□□ -0.61
Lsm6P62313 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lsm6P62313 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lsm6P62313 Gm29649-201ENSMUST00000185649 419 ntBASIC11.23□□□□□ -0.61
Lsm6P62313 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lsm6P62313 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.23□□□□□ -0.61
Lsm6P62313 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.23□□□□□ -0.61
Lsm6P62313 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.23□□□□□ -0.61
Lsm6P62313 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Lsm6P62313 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lsm6P62313 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lsm6P62313 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lsm6P62313 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lsm6P62313 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Lsm6P62313 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Lsm6P62313 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lsm6P62313 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lsm6P62313 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lsm6P62313 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lsm6P62313 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lsm6P62313 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.23□□□□□ -0.61
Lsm6P62313 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lsm6P62313 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lsm6P62313 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lsm6P62313 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lsm6P62313 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lsm6P62313 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Lsm6P62313 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lsm6P62313 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lsm6P62313 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Lsm6P62313 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lsm6P62313 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.23□□□□□ -0.61
Lsm6P62313 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lsm6P62313 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lsm6P62313 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lsm6P62313 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Lsm6P62313 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lsm6P62313 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Lsm6P62313 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lsm6P62313 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lsm6P62313 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.22□□□□□ -0.61
Lsm6P62313 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lsm6P62313 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lsm6P62313 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.22□□□□□ -0.61
Lsm6P62313 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Lsm6P62313 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lsm6P62313 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Lsm6P62313 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lsm6P62313 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lsm6P62313 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lsm6P62313 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Lsm6P62313 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lsm6P62313 Gm27839-201ENSMUST00000184242 106 ntBASIC11.22□□□□□ -0.61
Lsm6P62313 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lsm6P62313 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.22□□□□□ -0.61
Lsm6P62313 Gm7561-201ENSMUST00000211203 886 ntBASIC11.22□□□□□ -0.61
Lsm6P62313 Gm7653-201ENSMUST00000214567 508 ntBASIC11.22□□□□□ -0.61
Lsm6P62313 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.22□□□□□ -0.61
Lsm6P62313 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.22□□□□□ -0.61
Lsm6P62313 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lsm6P62313 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lsm6P62313 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lsm6P62313 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lsm6P62313 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lsm6P62313 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lsm6P62313 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lsm6P62313 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lsm6P62313 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lsm6P62313 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Lsm6P62313 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Lsm6P62313 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lsm6P62313 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lsm6P62313 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Lsm6P62313 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.21□□□□□ -0.61
Lsm6P62313 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm6P62313 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm6P62313 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm6P62313 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm6P62313 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm6P62313 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm6P62313 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm6P62313 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms