Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Sec61a1P61620 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a1P61620 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a1P61620 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Sec61a1P61620 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a1P61620 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.28□□□□□ -0.6
Sec61a1P61620 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a1P61620 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.28□□□□□ -0.6
Sec61a1P61620 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a1P61620 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a1P61620 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Sec61a1P61620 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a1P61620 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a1P61620 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Sec61a1P61620 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.28□□□□□ -0.6
Sec61a1P61620 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.28□□□□□ -0.6
Sec61a1P61620 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a1P61620 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a1P61620 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.28□□□□□ -0.6
Sec61a1P61620 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a1P61620 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a1P61620 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.28□□□□□ -0.6
Sec61a1P61620 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a1P61620 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Sec61a1P61620 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a1P61620 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a1P61620 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.28□□□□□ -0.6
Sec61a1P61620 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a1P61620 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a1P61620 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Sec61a1P61620 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a1P61620 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a1P61620 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a1P61620 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a1P61620 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a1P61620 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a1P61620 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a1P61620 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.28□□□□□ -0.6
Sec61a1P61620 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.28□□□□□ -0.6
Sec61a1P61620 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
Sec61a1P61620 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sec61a1P61620 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.27□□□□□ -0.6
Sec61a1P61620 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sec61a1P61620 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sec61a1P61620 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Sec61a1P61620 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sec61a1P61620 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.27□□□□□ -0.6
Sec61a1P61620 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sec61a1P61620 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a1P61620 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.27□□□□□ -0.61
Sec61a1P61620 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a1P61620 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a1P61620 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a1P61620 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a1P61620 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a1P61620 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a1P61620 Gm15806-201ENSMUST00000120696 955 ntBASIC11.27□□□□□ -0.61
Sec61a1P61620 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.27□□□□□ -0.61
Sec61a1P61620 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a1P61620 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a1P61620 Gm18187-201ENSMUST00000196476 984 ntBASIC11.27□□□□□ -0.61
Sec61a1P61620 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.27□□□□□ -0.61
Sec61a1P61620 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a1P61620 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a1P61620 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a1P61620 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a1P61620 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.27□□□□□ -0.61
Sec61a1P61620 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a1P61620 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Sec61a1P61620 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a1P61620 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a1P61620 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a1P61620 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a1P61620 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a1P61620 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a1P61620 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a1P61620 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.27□□□□□ -0.61
Sec61a1P61620 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a1P61620 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61a1P61620 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a1P61620 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a1P61620 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.26□□□□□ -0.61
Sec61a1P61620 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a1P61620 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a1P61620 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.26□□□□□ -0.61
Sec61a1P61620 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a1P61620 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a1P61620 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.26□□□□□ -0.61
Sec61a1P61620 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a1P61620 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Sec61a1P61620 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a1P61620 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Sec61a1P61620 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Sec61a1P61620 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a1P61620 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.26□□□□□ -0.61
Sec61a1P61620 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a1P61620 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Sec61a1P61620 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.26□□□□□ -0.61
Sec61a1P61620 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.26□□□□□ -0.61
Sec61a1P61620 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms