Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm1P58771 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Tpm1P58771 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm1P58771 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Tpm1P58771 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm1P58771 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm1P58771 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm1P58771 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm1P58771 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm1P58771 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm1P58771 Gm11524-201ENSMUST00000119349 807 ntBASIC14.26□□□□□ -0.13
Tpm1P58771 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Tpm1P58771 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.26□□□□□ -0.13
Tpm1P58771 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm1P58771 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.26□□□□□ -0.13
Tpm1P58771 Gm43094-201ENSMUST00000196549 921 ntBASIC14.26□□□□□ -0.13
Tpm1P58771 Gm18636-201ENSMUST00000218846 1066 ntBASIC14.26□□□□□ -0.13
Tpm1P58771 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm1P58771 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm1P58771 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm1P58771 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm1P58771 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm1P58771 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm1P58771 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm1P58771 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC14.26□□□□□ -0.13
Tpm1P58771 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm1P58771 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm1P58771 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.26□□□□□ -0.13
Tpm1P58771 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm1P58771 Gm1995-201ENSMUST00000220838 2602 ntBASIC14.26□□□□□ -0.13
Tpm1P58771 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm1P58771 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm1P58771 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.25□□□□□ -0.13
Tpm1P58771 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tpm1P58771 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Tpm1P58771 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tpm1P58771 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tpm1P58771 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tpm1P58771 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tpm1P58771 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tpm1P58771 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tpm1P58771 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tpm1P58771 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
Tpm1P58771 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.25□□□□□ -0.13
Tpm1P58771 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tpm1P58771 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Tpm1P58771 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Tpm1P58771 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.25□□□□□ -0.13
Tpm1P58771 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Tpm1P58771 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tpm1P58771 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tpm1P58771 Gm42550-201ENSMUST00000201553 960 ntBASIC14.25□□□□□ -0.13
Tpm1P58771 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.25□□□□□ -0.13
Tpm1P58771 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tpm1P58771 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tpm1P58771 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Tpm1P58771 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tpm1P58771 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tpm1P58771 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tpm1P58771 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Tpm1P58771 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tpm1P58771 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tpm1P58771 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tpm1P58771 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.25□□□□□ -0.13
Tpm1P58771 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.25□□□□□ -0.13
Tpm1P58771 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm1P58771 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm1P58771 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Tpm1P58771 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm1P58771 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm1P58771 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC14.24□□□□□ -0.13
Tpm1P58771 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm1P58771 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm1P58771 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm1P58771 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm1P58771 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC14.24□□□□□ -0.13
Tpm1P58771 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm1P58771 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm1P58771 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm1P58771 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm1P58771 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm1P58771 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm1P58771 Gm26464-201ENSMUST00000157094 305 ntBASIC14.24□□□□□ -0.13
Tpm1P58771 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.24□□□□□ -0.13
Tpm1P58771 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm1P58771 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.24□□□□□ -0.13
Tpm1P58771 Gm19078-201ENSMUST00000206311 727 ntBASIC14.24□□□□□ -0.13
Tpm1P58771 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm1P58771 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm1P58771 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm1P58771 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Tpm1P58771 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm1P58771 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm1P58771 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm1P58771 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm1P58771 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm1P58771 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm1P58771 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm1P58771 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Tpm1P58771 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms