Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Rrp1P56183 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rrp1P56183 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rrp1P56183 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rrp1P56183 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rrp1P56183 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rrp1P56183 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rrp1P56183 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Rrp1P56183 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.4□□□□□ -0.1
Rrp1P56183 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.4□□□□□ -0.1
Rrp1P56183 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rrp1P56183 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Rrp1P56183 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rrp1P56183 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rrp1P56183 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Rrp1P56183 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rrp1P56183 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rrp1P56183 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC14.4□□□□□ -0.1
Rrp1P56183 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rrp1P56183 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rrp1P56183 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rrp1P56183 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Rrp1P56183 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Rrp1P56183 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC14.39□□□□□ -0.11
Rrp1P56183 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rrp1P56183 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rrp1P56183 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rrp1P56183 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rrp1P56183 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rrp1P56183 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rrp1P56183 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rrp1P56183 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rrp1P56183 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.39□□□□□ -0.11
Rrp1P56183 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC14.39□□□□□ -0.11
Rrp1P56183 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rrp1P56183 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.39□□□□□ -0.11
Rrp1P56183 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.39□□□□□ -0.11
Rrp1P56183 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.39□□□□□ -0.11
Rrp1P56183 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.39□□□□□ -0.11
Rrp1P56183 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.39□□□□□ -0.11
Rrp1P56183 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rrp1P56183 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.39□□□□□ -0.11
Rrp1P56183 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rrp1P56183 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rrp1P56183 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rrp1P56183 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rrp1P56183 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rrp1P56183 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rrp1P56183 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rrp1P56183 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
Rrp1P56183 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.39□□□□□ -0.11
Rrp1P56183 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.39□□□□□ -0.11
Rrp1P56183 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rrp1P56183 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp1P56183 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp1P56183 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp1P56183 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.38□□□□□ -0.11
Rrp1P56183 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp1P56183 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp1P56183 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp1P56183 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC14.38□□□□□ -0.11
Rrp1P56183 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp1P56183 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp1P56183 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp1P56183 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rrp1P56183 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp1P56183 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.38□□□□□ -0.11
Rrp1P56183 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp1P56183 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp1P56183 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp1P56183 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp1P56183 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Rrp1P56183 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp1P56183 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.38□□□□□ -0.11
Rrp1P56183 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.38□□□□□ -0.11
Rrp1P56183 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp1P56183 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.38□□□□□ -0.11
Rrp1P56183 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC14.38□□□□□ -0.11
Rrp1P56183 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.38□□□□□ -0.11
Rrp1P56183 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp1P56183 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp1P56183 AC166574.4-201ENSMUST00000227165 1937 ntBASIC14.38□□□□□ -0.11
Rrp1P56183 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp1P56183 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp1P56183 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp1P56183 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp1P56183 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp1P56183 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Rrp1P56183 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp1P56183 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rrp1P56183 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rrp1P56183 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rrp1P56183 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rrp1P56183 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rrp1P56183 CT009713.10-201ENSMUST00000225013 1986 ntBASIC14.37□□□□□ -0.11
Rrp1P56183 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rrp1P56183 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rrp1P56183 Gm14921-201ENSMUST00000118643 908 ntBASIC14.37□□□□□ -0.11
Rrp1P56183 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rrp1P56183 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms