Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdh11P55288 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdh11P55288 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdh11P55288 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Cdh11P55288 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.67□□□□□ -0.54
Cdh11P55288 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdh11P55288 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdh11P55288 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdh11P55288 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdh11P55288 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cdh11P55288 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.67□□□□□ -0.54
Cdh11P55288 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdh11P55288 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdh11P55288 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdh11P55288 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdh11P55288 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cdh11P55288 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdh11P55288 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdh11P55288 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cdh11P55288 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdh11P55288 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdh11P55288 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdh11P55288 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdh11P55288 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh11P55288 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh11P55288 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh11P55288 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh11P55288 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh11P55288 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cdh11P55288 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh11P55288 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh11P55288 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh11P55288 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh11P55288 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh11P55288 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.66□□□□□ -0.54
Cdh11P55288 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh11P55288 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh11P55288 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.66□□□□□ -0.54
Cdh11P55288 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.66□□□□□ -0.54
Cdh11P55288 Gm11425-201ENSMUST00000119608 498 ntBASIC11.66□□□□□ -0.54
Cdh11P55288 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh11P55288 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh11P55288 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh11P55288 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cdh11P55288 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh11P55288 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cdh11P55288 Gm9396-201ENSMUST00000076703 567 ntBASIC11.66□□□□□ -0.54
Cdh11P55288 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh11P55288 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cdh11P55288 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cdh11P55288 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.66□□□□□ -0.54
Cdh11P55288 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.66□□□□□ -0.54
Cdh11P55288 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cdh11P55288 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh11P55288 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh11P55288 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh11P55288 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh11P55288 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh11P55288 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh11P55288 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh11P55288 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh11P55288 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh11P55288 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh11P55288 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh11P55288 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh11P55288 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh11P55288 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh11P55288 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.65□□□□□ -0.54
Cdh11P55288 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Cdh11P55288 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh11P55288 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh11P55288 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.65□□□□□ -0.54
Cdh11P55288 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh11P55288 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.65□□□□□ -0.54
Cdh11P55288 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh11P55288 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh11P55288 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
Cdh11P55288 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Cdh11P55288 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh11P55288 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.65□□□□□ -0.54
Cdh11P55288 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh11P55288 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.65□□□□□ -0.54
Cdh11P55288 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh11P55288 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh11P55288 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh11P55288 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Cdh11P55288 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh11P55288 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh11P55288 Gm38671-201ENSMUST00000200573 130 ntBASIC11.65□□□□□ -0.54
Cdh11P55288 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.65□□□□□ -0.54
Cdh11P55288 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.65□□□□□ -0.54
Cdh11P55288 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Cdh11P55288 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.65□□□□□ -0.54
Cdh11P55288 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Cdh11P55288 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh11P55288 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh11P55288 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh11P55288 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh11P55288 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.65□□□□□ -0.54
Cdh11P55288 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms