Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nub1P54729 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nub1P54729 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nub1P54729 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nub1P54729 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nub1P54729 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nub1P54729 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.8□□□□□ -0.2
Nub1P54729 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nub1P54729 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.8□□□□□ -0.2
Nub1P54729 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nub1P54729 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.79□□□□□ -0.2
Nub1P54729 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Nub1P54729 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.79□□□□□ -0.2
Nub1P54729 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.79□□□□□ -0.2
Nub1P54729 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nub1P54729 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nub1P54729 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nub1P54729 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nub1P54729 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nub1P54729 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Nub1P54729 Gm14704-201ENSMUST00000120300 874 ntBASIC13.79□□□□□ -0.2
Nub1P54729 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nub1P54729 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.79□□□□□ -0.2
Nub1P54729 Mir1982-201ENSMUST00000157368 74 ntBASIC13.79□□□□□ -0.2
Nub1P54729 Gm19163-201ENSMUST00000223313 780 ntBASIC13.79□□□□□ -0.2
Nub1P54729 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nub1P54729 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC13.79□□□□□ -0.2
Nub1P54729 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Nub1P54729 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.79□□□□□ -0.2
Nub1P54729 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nub1P54729 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nub1P54729 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nub1P54729 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Nub1P54729 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nub1P54729 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.79□□□□□ -0.2
Nub1P54729 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nub1P54729 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nub1P54729 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Nub1P54729 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nub1P54729 Gm9544-201ENSMUST00000223349 2482 ntBASIC13.79□□□□□ -0.2
Nub1P54729 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nub1P54729 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nub1P54729 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nub1P54729 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.78□□□□□ -0.2
Nub1P54729 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nub1P54729 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nub1P54729 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.78□□□□□ -0.2
Nub1P54729 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Nub1P54729 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nub1P54729 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nub1P54729 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Nub1P54729 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Nub1P54729 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Nub1P54729 Gm12384-201ENSMUST00000119228 919 ntBASIC13.78□□□□□ -0.2
Nub1P54729 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.78□□□□□ -0.2
Nub1P54729 Gm22121-201ENSMUST00000175148 54 ntBASIC13.78□□□□□ -0.2
Nub1P54729 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.78□□□□□ -0.2
Nub1P54729 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.78□□□□□ -0.2
Nub1P54729 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.78□□□□□ -0.2
Nub1P54729 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nub1P54729 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nub1P54729 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nub1P54729 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Nub1P54729 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nub1P54729 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Nub1P54729 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nub1P54729 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nub1P54729 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nub1P54729 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nub1P54729 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nub1P54729 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.78□□□□□ -0.2
Nub1P54729 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nub1P54729 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nub1P54729 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Nub1P54729 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.2
Nub1P54729 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nub1P54729 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nub1P54729 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nub1P54729 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Nub1P54729 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Nub1P54729 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nub1P54729 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Nub1P54729 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nub1P54729 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nub1P54729 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nub1P54729 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Nub1P54729 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.77□□□□□ -0.21
Nub1P54729 Gm12291-201ENSMUST00000121627 311 ntBASIC13.77□□□□□ -0.21
Nub1P54729 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nub1P54729 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.77□□□□□ -0.21
Nub1P54729 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nub1P54729 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.21
Nub1P54729 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.77□□□□□ -0.21
Nub1P54729 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nub1P54729 Gm4768-201ENSMUST00000206199 686 ntBASIC13.77□□□□□ -0.21
Nub1P54729 Gm32025-201ENSMUST00000217960 307 ntBASIC13.77□□□□□ -0.21
Nub1P54729 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nub1P54729 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.77□□□□□ -0.21
Nub1P54729 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nub1P54729 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms