Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cacnb3P54285 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cacnb3P54285 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cacnb3P54285 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cacnb3P54285 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cacnb3P54285 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cacnb3P54285 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Cacnb3P54285 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC14.86□□□□□ -0.03
Cacnb3P54285 Gm14263-201ENSMUST00000117955 746 ntBASIC14.86□□□□□ -0.03
Cacnb3P54285 Gm16481-201ENSMUST00000119074 1227 ntBASIC14.86□□□□□ -0.03
Cacnb3P54285 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC14.86□□□□□ -0.03
Cacnb3P54285 Gm11331-201ENSMUST00000119764 288 ntBASIC14.86□□□□□ -0.03
Cacnb3P54285 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cacnb3P54285 Gm22334-201ENSMUST00000158070 133 ntBASIC14.86□□□□□ -0.03
Cacnb3P54285 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.86□□□□□ -0.03
Cacnb3P54285 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cacnb3P54285 Gm28882-201ENSMUST00000185504 314 ntBASIC14.86□□□□□ -0.03
Cacnb3P54285 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cacnb3P54285 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cacnb3P54285 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cacnb3P54285 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cacnb3P54285 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cacnb3P54285 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Cacnb3P54285 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cacnb3P54285 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cacnb3P54285 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cacnb3P54285 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cacnb3P54285 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cacnb3P54285 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cacnb3P54285 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacnb3P54285 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.85□□□□□ -0.03
Cacnb3P54285 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cacnb3P54285 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
Cacnb3P54285 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacnb3P54285 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cacnb3P54285 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacnb3P54285 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacnb3P54285 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacnb3P54285 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacnb3P54285 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cacnb3P54285 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacnb3P54285 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacnb3P54285 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Cacnb3P54285 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
Cacnb3P54285 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacnb3P54285 Gm13813-201ENSMUST00000120998 787 ntBASIC14.85□□□□□ -0.03
Cacnb3P54285 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.85□□□□□ -0.03
Cacnb3P54285 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Cacnb3P54285 Gm27552-201ENSMUST00000183351 62 ntBASIC14.85□□□□□ -0.03
Cacnb3P54285 Gm27844-201ENSMUST00000183613 62 ntBASIC14.85□□□□□ -0.03
Cacnb3P54285 Gm34767-201ENSMUST00000191813 1062 ntBASIC14.85□□□□□ -0.03
Cacnb3P54285 Gm44136-201ENSMUST00000203819 1106 ntBASIC14.85□□□□□ -0.03
Cacnb3P54285 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC14.85□□□□□ -0.03
Cacnb3P54285 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacnb3P54285 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacnb3P54285 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacnb3P54285 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cacnb3P54285 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Cacnb3P54285 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacnb3P54285 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cacnb3P54285 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacnb3P54285 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacnb3P54285 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacnb3P54285 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.85□□□□□ -0.03
Cacnb3P54285 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacnb3P54285 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacnb3P54285 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.84□□□□□ -0.03
Cacnb3P54285 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cacnb3P54285 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cacnb3P54285 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.84□□□□□ -0.03
Cacnb3P54285 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacnb3P54285 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacnb3P54285 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacnb3P54285 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacnb3P54285 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacnb3P54285 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cacnb3P54285 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacnb3P54285 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Cacnb3P54285 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacnb3P54285 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cacnb3P54285 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.84□□□□□ -0.03
Cacnb3P54285 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cacnb3P54285 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cacnb3P54285 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC14.84□□□□□ -0.03
Cacnb3P54285 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cacnb3P54285 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.84□□□□□ -0.03
Cacnb3P54285 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacnb3P54285 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC14.84□□□□□ -0.03
Cacnb3P54285 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacnb3P54285 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cacnb3P54285 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacnb3P54285 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacnb3P54285 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacnb3P54285 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacnb3P54285 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.84□□□□□ -0.03
Cacnb3P54285 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Cacnb3P54285 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cacnb3P54285 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Cacnb3P54285 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cacnb3P54285 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms