Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Msh6P54276 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Msh6P54276 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Msh6P54276 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC16.1■□□□□ 0.17
Msh6P54276 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Msh6P54276 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Msh6P54276 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Msh6P54276 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC16.1■□□□□ 0.17
Msh6P54276 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Msh6P54276 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Msh6P54276 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
Msh6P54276 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Msh6P54276 Gm5863-201ENSMUST00000121760 1008 ntBASIC16.1■□□□□ 0.17
Msh6P54276 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC16.1■□□□□ 0.17
Msh6P54276 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC16.1■□□□□ 0.17
Msh6P54276 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC16.1■□□□□ 0.17
Msh6P54276 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
Msh6P54276 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC16.1■□□□□ 0.17
Msh6P54276 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC16.1■□□□□ 0.17
Msh6P54276 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Msh6P54276 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Msh6P54276 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Msh6P54276 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC16.1■□□□□ 0.17
Msh6P54276 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Msh6P54276 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Msh6P54276 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Msh6P54276 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Msh6P54276 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Msh6P54276 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Msh6P54276 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Msh6P54276 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Msh6P54276 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Msh6P54276 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Msh6P54276 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Msh6P54276 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Msh6P54276 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Msh6P54276 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Msh6P54276 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Msh6P54276 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Msh6P54276 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Msh6P54276 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Msh6P54276 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Msh6P54276 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Msh6P54276 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Msh6P54276 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Msh6P54276 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Msh6P54276 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC16.09■□□□□ 0.17
Msh6P54276 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Msh6P54276 Gm32999-201ENSMUST00000192693 562 ntBASIC16.09■□□□□ 0.17
Msh6P54276 Gm5051-201ENSMUST00000204085 485 ntBASIC16.09■□□□□ 0.17
Msh6P54276 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC16.09■□□□□ 0.17
Msh6P54276 AC154305.4-201ENSMUST00000224520 614 ntBASIC16.09■□□□□ 0.17
Msh6P54276 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Msh6P54276 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Msh6P54276 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Msh6P54276 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Msh6P54276 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Msh6P54276 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Msh6P54276 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Msh6P54276 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Msh6P54276 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC16.09■□□□□ 0.17
Msh6P54276 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Msh6P54276 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Msh6P54276 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Msh6P54276 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Msh6P54276 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Msh6P54276 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Msh6P54276 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Msh6P54276 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Msh6P54276 Gm12314-201ENSMUST00000118104 538 ntBASIC16.08■□□□□ 0.16
Msh6P54276 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Msh6P54276 Gm23699-201ENSMUST00000158835 135 ntBASIC16.08■□□□□ 0.16
Msh6P54276 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Msh6P54276 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Msh6P54276 Gm3508-201ENSMUST00000186012 792 ntBASIC16.08■□□□□ 0.16
Msh6P54276 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC16.08■□□□□ 0.16
Msh6P54276 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Msh6P54276 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC16.08■□□□□ 0.16
Msh6P54276 Gm17812-201ENSMUST00000204935 318 ntBASIC16.08■□□□□ 0.16
Msh6P54276 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC16.08■□□□□ 0.16
Msh6P54276 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC16.08■□□□□ 0.16
Msh6P54276 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Msh6P54276 Gm18730-201ENSMUST00000218038 343 ntBASIC16.08■□□□□ 0.16
Msh6P54276 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Msh6P54276 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Msh6P54276 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Msh6P54276 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Msh6P54276 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Msh6P54276 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Msh6P54276 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Msh6P54276 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Msh6P54276 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Msh6P54276 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Msh6P54276 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Msh6P54276 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Msh6P54276 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Msh6P54276 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Msh6P54276 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Msh6P54276 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Msh6P54276 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms