Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox3P53784 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Sox3P53784 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sox3P53784 Mospd4-201ENSMUST00000180618 576 ntBASIC12.27□□□□□ -0.45
Sox3P53784 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.27□□□□□ -0.45
Sox3P53784 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sox3P53784 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.27□□□□□ -0.45
Sox3P53784 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Sox3P53784 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Sox3P53784 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox3P53784 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Sox3P53784 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sox3P53784 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox3P53784 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox3P53784 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox3P53784 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Sox3P53784 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sox3P53784 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox3P53784 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox3P53784 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox3P53784 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Sox3P53784 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.27□□□□□ -0.45
Sox3P53784 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox3P53784 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.27□□□□□ -0.45
Sox3P53784 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox3P53784 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox3P53784 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
Sox3P53784 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox3P53784 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox3P53784 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.26□□□□□ -0.45
Sox3P53784 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox3P53784 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Sox3P53784 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox3P53784 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.26□□□□□ -0.45
Sox3P53784 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.26□□□□□ -0.45
Sox3P53784 Gm11628-201ENSMUST00000117568 171 ntBASIC12.26□□□□□ -0.45
Sox3P53784 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.26□□□□□ -0.45
Sox3P53784 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox3P53784 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox3P53784 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox3P53784 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Sox3P53784 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.26□□□□□ -0.45
Sox3P53784 Gm29741-201ENSMUST00000192667 421 ntBASIC12.26□□□□□ -0.45
Sox3P53784 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.26□□□□□ -0.45
Sox3P53784 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.26□□□□□ -0.45
Sox3P53784 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.26□□□□□ -0.45
Sox3P53784 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.26□□□□□ -0.45
Sox3P53784 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox3P53784 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox3P53784 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox3P53784 Gm10146-201ENSMUST00000072739 309 ntBASIC12.26□□□□□ -0.45
Sox3P53784 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox3P53784 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox3P53784 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.26□□□□□ -0.45
Sox3P53784 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox3P53784 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox3P53784 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.26□□□□□ -0.45
Sox3P53784 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox3P53784 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox3P53784 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Sox3P53784 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox3P53784 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Sox3P53784 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.26□□□□□ -0.45
Sox3P53784 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox3P53784 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sox3P53784 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox3P53784 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sox3P53784 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.25□□□□□ -0.45
Sox3P53784 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.25□□□□□ -0.45
Sox3P53784 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox3P53784 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sox3P53784 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox3P53784 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox3P53784 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Sox3P53784 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sox3P53784 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.25□□□□□ -0.45
Sox3P53784 Gm24830-201ENSMUST00000102024 166 ntBASIC12.25□□□□□ -0.45
Sox3P53784 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox3P53784 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.25□□□□□ -0.45
Sox3P53784 Gm11222-201ENSMUST00000119005 738 ntBASIC12.25□□□□□ -0.45
Sox3P53784 Gm11964-201ENSMUST00000120982 444 ntBASIC12.25□□□□□ -0.45
Sox3P53784 Gm25890-201ENSMUST00000177643 165 ntBASIC12.25□□□□□ -0.45
Sox3P53784 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.25□□□□□ -0.45
Sox3P53784 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.25□□□□□ -0.45
Sox3P53784 Gm22614-201ENSMUST00000178300 165 ntBASIC12.25□□□□□ -0.45
Sox3P53784 Gm2260-201ENSMUST00000184965 657 ntBASIC12.25□□□□□ -0.45
Sox3P53784 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.25□□□□□ -0.45
Sox3P53784 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox3P53784 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox3P53784 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox3P53784 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox3P53784 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox3P53784 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox3P53784 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Sox3P53784 Gm22042-201ENSMUST00000082989 165 ntBASIC12.25□□□□□ -0.45
Sox3P53784 Gm26232-201ENSMUST00000083360 166 ntBASIC12.25□□□□□ -0.45
Sox3P53784 Gm24136-201ENSMUST00000083374 165 ntBASIC12.25□□□□□ -0.45
Sox3P53784 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.25□□□□□ -0.45
Sox3P53784 Gm26110-201ENSMUST00000083971 165 ntBASIC12.25□□□□□ -0.45
Sox3P53784 Mir497b-201ENSMUST00000093601 125 ntBASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms