Protein–RNA interactions for Protein: P50586

Tub, Tubby protein, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TubP50586 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
TubP50586 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TubP50586 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TubP50586 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
TubP50586 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TubP50586 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TubP50586 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TubP50586 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TubP50586 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TubP50586 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
TubP50586 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TubP50586 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TubP50586 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TubP50586 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TubP50586 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TubP50586 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TubP50586 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TubP50586 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TubP50586 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.11□□□□□ -0.31
TubP50586 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TubP50586 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TubP50586 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.11□□□□□ -0.31
TubP50586 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.11□□□□□ -0.31
TubP50586 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.11□□□□□ -0.31
TubP50586 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.11□□□□□ -0.31
TubP50586 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TubP50586 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
TubP50586 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.11□□□□□ -0.31
TubP50586 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
TubP50586 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TubP50586 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TubP50586 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TubP50586 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
TubP50586 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TubP50586 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TubP50586 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
TubP50586 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TubP50586 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TubP50586 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TubP50586 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TubP50586 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.1□□□□□ -0.31
TubP50586 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TubP50586 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TubP50586 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TubP50586 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TubP50586 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
TubP50586 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TubP50586 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TubP50586 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TubP50586 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TubP50586 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TubP50586 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.1□□□□□ -0.31
TubP50586 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TubP50586 Gm13392-201ENSMUST00000117708 150 ntBASIC13.1□□□□□ -0.31
TubP50586 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.1□□□□□ -0.31
TubP50586 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.1□□□□□ -0.31
TubP50586 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
TubP50586 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
TubP50586 Gm3890-201ENSMUST00000182416 207 ntBASIC13.1□□□□□ -0.31
TubP50586 Gm27572-201ENSMUST00000183702 255 ntBASIC13.1□□□□□ -0.31
TubP50586 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.1□□□□□ -0.31
TubP50586 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TubP50586 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
TubP50586 Gm19309-201ENSMUST00000218295 205 ntBASIC13.1□□□□□ -0.31
TubP50586 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TubP50586 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TubP50586 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TubP50586 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TubP50586 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TubP50586 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TubP50586 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TubP50586 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TubP50586 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TubP50586 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TubP50586 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TubP50586 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TubP50586 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TubP50586 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
TubP50586 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.1□□□□□ -0.31
TubP50586 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
TubP50586 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TubP50586 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TubP50586 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
TubP50586 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
TubP50586 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.09□□□□□ -0.31
TubP50586 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.09□□□□□ -0.31
TubP50586 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TubP50586 Gm8738-201ENSMUST00000172606 329 ntBASIC13.09□□□□□ -0.31
TubP50586 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.09□□□□□ -0.31
TubP50586 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TubP50586 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.09□□□□□ -0.31
TubP50586 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TubP50586 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TubP50586 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TubP50586 Gm10478-201ENSMUST00000084451 396 ntBASIC13.09□□□□□ -0.31
TubP50586 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
TubP50586 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
TubP50586 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TubP50586 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TubP50586 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms