Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ercc3P49135 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ercc3P49135 Gm9200-201ENSMUST00000118513 1354 ntBASIC15.18■□□□□ 0.02
Ercc3P49135 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ercc3P49135 Gm26616-202ENSMUST00000195676 3107 ntBASIC15.18■□□□□ 0.02
Ercc3P49135 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ercc3P49135 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Ercc3P49135 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Ercc3P49135 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ercc3P49135 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Ercc3P49135 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc3P49135 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc3P49135 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
Ercc3P49135 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc3P49135 Gm44094-201ENSMUST00000204703 2030 ntBASIC15.17■□□□□ 0.02
Ercc3P49135 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc3P49135 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc3P49135 AC117194.1-201ENSMUST00000224847 3002 ntBASIC15.17■□□□□ 0.02
Ercc3P49135 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ercc3P49135 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ercc3P49135 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc3P49135 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ercc3P49135 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc3P49135 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC15.17■□□□□ 0.02
Ercc3P49135 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Ercc3P49135 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc3P49135 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc3P49135 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC15.17■□□□□ 0.02
Ercc3P49135 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc3P49135 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC15.17■□□□□ 0.02
Ercc3P49135 Gm3890-201ENSMUST00000182416 207 ntBASIC15.17■□□□□ 0.02
Ercc3P49135 Gm42693-201ENSMUST00000196779 631 ntBASIC15.17■□□□□ 0.02
Ercc3P49135 Gm18916-201ENSMUST00000198264 1246 ntBASIC15.17■□□□□ 0.02
Ercc3P49135 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc3P49135 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc3P49135 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Ercc3P49135 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ercc3P49135 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ercc3P49135 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc3P49135 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc3P49135 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc3P49135 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc3P49135 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc3P49135 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc3P49135 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc3P49135 Zkscan3-207ENSMUST00000223831 2101 ntBASIC15.16■□□□□ 0.02
Ercc3P49135 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc3P49135 Gm44775-201ENSMUST00000207266 1456 ntBASIC15.16■□□□□ 0.02
Ercc3P49135 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc3P49135 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC15.16■□□□□ 0.02
Ercc3P49135 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc3P49135 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc3P49135 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc3P49135 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc3P49135 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc3P49135 Gm10728-201ENSMUST00000194292 1829 ntBASIC15.16■□□□□ 0.02
Ercc3P49135 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc3P49135 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC15.16■□□□□ 0.02
Ercc3P49135 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC15.16■□□□□ 0.02
Ercc3P49135 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC15.16■□□□□ 0.02
Ercc3P49135 Gm38002-201ENSMUST00000193255 180 ntBASIC15.16■□□□□ 0.02
Ercc3P49135 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc3P49135 AC069562.3-201ENSMUST00000225387 587 ntBASIC15.16■□□□□ 0.02
Ercc3P49135 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc3P49135 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Ercc3P49135 Gm10478-201ENSMUST00000084451 396 ntBASIC15.16■□□□□ 0.02
Ercc3P49135 Gm7002-201ENSMUST00000221386 2165 ntBASIC15.16■□□□□ 0.02
Ercc3P49135 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc3P49135 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc3P49135 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc3P49135 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ercc3P49135 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ercc3P49135 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Ercc3P49135 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ercc3P49135 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc3P49135 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC15.15■□□□□ 0.02
Ercc3P49135 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc3P49135 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC15.15■□□□□ 0.02
Ercc3P49135 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc3P49135 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC15.15■□□□□ 0.02
Ercc3P49135 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc3P49135 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc3P49135 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc3P49135 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc3P49135 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc3P49135 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC15.15■□□□□ 0.02
Ercc3P49135 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc3P49135 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Ercc3P49135 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC15.15■□□□□ 0.02
Ercc3P49135 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC15.15■□□□□ 0.02
Ercc3P49135 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
Ercc3P49135 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc3P49135 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC15.15■□□□□ 0.02
Ercc3P49135 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC15.15■□□□□ 0.02
Ercc3P49135 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC15.15■□□□□ 0.02
Ercc3P49135 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc3P49135 n-R5s195-201ENSMUST00000082891 119 ntBASIC15.15■□□□□ 0.02
Ercc3P49135 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc3P49135 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ercc3P49135 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms