Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
GdnfP48540 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
GdnfP48540 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
GdnfP48540 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
GdnfP48540 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
GdnfP48540 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.23□□□□□ -0.61
GdnfP48540 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
GdnfP48540 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
GdnfP48540 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
GdnfP48540 Gm28631-201ENSMUST00000190740 334 ntBASIC11.23□□□□□ -0.61
GdnfP48540 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
GdnfP48540 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
GdnfP48540 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.23□□□□□ -0.61
GdnfP48540 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
GdnfP48540 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
GdnfP48540 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
GdnfP48540 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
GdnfP48540 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
GdnfP48540 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
GdnfP48540 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
GdnfP48540 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.23□□□□□ -0.61
GdnfP48540 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
GdnfP48540 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
GdnfP48540 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
GdnfP48540 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
GdnfP48540 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.22□□□□□ -0.61
GdnfP48540 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
GdnfP48540 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
GdnfP48540 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
GdnfP48540 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
GdnfP48540 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
GdnfP48540 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
GdnfP48540 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
GdnfP48540 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
GdnfP48540 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
GdnfP48540 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.22□□□□□ -0.61
GdnfP48540 Gm12341-201ENSMUST00000119724 503 ntBASIC11.22□□□□□ -0.61
GdnfP48540 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
GdnfP48540 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
GdnfP48540 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
GdnfP48540 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
GdnfP48540 Gm6546-201ENSMUST00000192096 766 ntBASIC11.22□□□□□ -0.61
GdnfP48540 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
GdnfP48540 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.22□□□□□ -0.61
GdnfP48540 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
GdnfP48540 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
GdnfP48540 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
GdnfP48540 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
GdnfP48540 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
GdnfP48540 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
GdnfP48540 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
GdnfP48540 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
GdnfP48540 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
GdnfP48540 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
GdnfP48540 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
GdnfP48540 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
GdnfP48540 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
GdnfP48540 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
GdnfP48540 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
GdnfP48540 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
GdnfP48540 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
GdnfP48540 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
GdnfP48540 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
GdnfP48540 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
GdnfP48540 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
GdnfP48540 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
GdnfP48540 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.21□□□□□ -0.61
GdnfP48540 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
GdnfP48540 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.21□□□□□ -0.61
GdnfP48540 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
GdnfP48540 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
GdnfP48540 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
GdnfP48540 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
GdnfP48540 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
GdnfP48540 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
GdnfP48540 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
GdnfP48540 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
GdnfP48540 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
GdnfP48540 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
GdnfP48540 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
GdnfP48540 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.61
GdnfP48540 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
GdnfP48540 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.21□□□□□ -0.61
GdnfP48540 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.21□□□□□ -0.61
GdnfP48540 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.21□□□□□ -0.61
GdnfP48540 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.21□□□□□ -0.61
GdnfP48540 Gm12403-201ENSMUST00000121384 959 ntBASIC11.21□□□□□ -0.61
GdnfP48540 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.21□□□□□ -0.61
GdnfP48540 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.21□□□□□ -0.61
GdnfP48540 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC11.21□□□□□ -0.61
GdnfP48540 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.21□□□□□ -0.61
GdnfP48540 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.21□□□□□ -0.61
GdnfP48540 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.21□□□□□ -0.61
GdnfP48540 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.21□□□□□ -0.61
GdnfP48540 Gm36991-201ENSMUST00000191800 648 ntBASIC11.21□□□□□ -0.61
GdnfP48540 Gm37917-201ENSMUST00000194711 392 ntBASIC11.21□□□□□ -0.61
GdnfP48540 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.21□□□□□ -0.61
GdnfP48540 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.21□□□□□ -0.61
GdnfP48540 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.21□□□□□ -0.61
GdnfP48540 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms