Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-6P43688 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Gm24830-201ENSMUST00000102024 166 ntBASIC12.09□□□□□ -0.47
Nkx2-6P43688 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.09□□□□□ -0.47
Nkx2-6P43688 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-6P43688 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Gm25890-201ENSMUST00000177643 165 ntBASIC12.09□□□□□ -0.47
Nkx2-6P43688 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.09□□□□□ -0.47
Nkx2-6P43688 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.09□□□□□ -0.47
Nkx2-6P43688 Gm22614-201ENSMUST00000178300 165 ntBASIC12.09□□□□□ -0.47
Nkx2-6P43688 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Gm31256-201ENSMUST00000194705 506 ntBASIC12.09□□□□□ -0.47
Nkx2-6P43688 Gm38092-201ENSMUST00000195600 653 ntBASIC12.09□□□□□ -0.47
Nkx2-6P43688 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Gm22042-201ENSMUST00000082989 165 ntBASIC12.09□□□□□ -0.47
Nkx2-6P43688 Gm26232-201ENSMUST00000083360 166 ntBASIC12.09□□□□□ -0.47
Nkx2-6P43688 Gm24136-201ENSMUST00000083374 165 ntBASIC12.09□□□□□ -0.47
Nkx2-6P43688 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.09□□□□□ -0.47
Nkx2-6P43688 Gm26110-201ENSMUST00000083971 165 ntBASIC12.09□□□□□ -0.47
Nkx2-6P43688 Mir433-201ENSMUST00000093564 124 ntBASIC12.09□□□□□ -0.47
Nkx2-6P43688 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-6P43688 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Nkx2-6P43688 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-6P43688 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Nkx2-6P43688 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Nkx2-6P43688 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.08□□□□□ -0.47
Nkx2-6P43688 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-6P43688 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.08□□□□□ -0.48
Nkx2-6P43688 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-6P43688 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Nkx2-6P43688 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-6P43688 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-6P43688 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-6P43688 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Nkx2-6P43688 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-6P43688 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-6P43688 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Nkx2-6P43688 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.08□□□□□ -0.48
Nkx2-6P43688 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.08□□□□□ -0.48
Nkx2-6P43688 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-6P43688 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-6P43688 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.08□□□□□ -0.48
Nkx2-6P43688 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-6P43688 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.08□□□□□ -0.48
Nkx2-6P43688 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Nkx2-6P43688 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-6P43688 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-6P43688 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-6P43688 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Nkx2-6P43688 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-6P43688 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Nkx2-6P43688 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-6P43688 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-6P43688 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-6P43688 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Nkx2-6P43688 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-6P43688 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-6P43688 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Nkx2-6P43688 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-6P43688 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-6P43688 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms