Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx2-2P42586 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx2-2P42586 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx2-2P42586 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx2-2P42586 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Nkx2-2P42586 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx2-2P42586 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx2-2P42586 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.54
Nkx2-2P42586 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx2-2P42586 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx2-2P42586 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx2-2P42586 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Nkx2-2P42586 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx2-2P42586 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx2-2P42586 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Nkx2-2P42586 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.71□□□□□ -0.54
Nkx2-2P42586 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx2-2P42586 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-2P42586 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-2P42586 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-2P42586 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.7□□□□□ -0.54
Nkx2-2P42586 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.7□□□□□ -0.54
Nkx2-2P42586 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-2P42586 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-2P42586 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-2P42586 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-2P42586 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-2P42586 Gm13492-201ENSMUST00000119772 665 ntBASIC11.7□□□□□ -0.54
Nkx2-2P42586 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.7□□□□□ -0.54
Nkx2-2P42586 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.7□□□□□ -0.54
Nkx2-2P42586 Gm18584-201ENSMUST00000203098 964 ntBASIC11.7□□□□□ -0.54
Nkx2-2P42586 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-2P42586 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-2P42586 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-2P42586 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.7□□□□□ -0.54
Nkx2-2P42586 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Nkx2-2P42586 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-2P42586 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-2P42586 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-2P42586 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.7□□□□□ -0.54
Nkx2-2P42586 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-2P42586 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-2P42586 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-2P42586 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-2P42586 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-2P42586 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-2P42586 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-2P42586 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx2-2P42586 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Nkx2-2P42586 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-2P42586 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.69□□□□□ -0.54
Nkx2-2P42586 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-2P42586 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-2P42586 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-2P42586 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-2P42586 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-2P42586 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-2P42586 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.69□□□□□ -0.54
Nkx2-2P42586 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-2P42586 Gm25261-201ENSMUST00000157416 134 ntBASIC11.69□□□□□ -0.54
Nkx2-2P42586 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Nkx2-2P42586 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.69□□□□□ -0.54
Nkx2-2P42586 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.69□□□□□ -0.54
Nkx2-2P42586 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-2P42586 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-2P42586 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Nkx2-2P42586 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Nkx2-2P42586 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Nkx2-2P42586 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-2P42586 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-2P42586 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-2P42586 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-2P42586 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-2P42586 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-2P42586 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-2P42586 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.69□□□□□ -0.54
Nkx2-2P42586 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Nkx2-2P42586 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-2P42586 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-2P42586 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-2P42586 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-2P42586 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx2-2P42586 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-2P42586 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Nkx2-2P42586 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Nkx2-2P42586 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-2P42586 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-2P42586 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-2P42586 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-2P42586 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-2P42586 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Nkx2-2P42586 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-2P42586 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-2P42586 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.68□□□□□ -0.54
Nkx2-2P42586 Gm11425-201ENSMUST00000119608 498 ntBASIC11.68□□□□□ -0.54
Nkx2-2P42586 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-2P42586 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-2P42586 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.68□□□□□ -0.54
Nkx2-2P42586 Mir1982-201ENSMUST00000157368 74 ntBASIC11.68□□□□□ -0.54
Nkx2-2P42586 Gm16379-201ENSMUST00000161469 348 ntBASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms