Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cxcl12P40224 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cxcl12P40224 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cxcl12P40224 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.09□□□□□ -0.31
Cxcl12P40224 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC13.09□□□□□ -0.31
Cxcl12P40224 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cxcl12P40224 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.09□□□□□ -0.31
Cxcl12P40224 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.09□□□□□ -0.31
Cxcl12P40224 Gm5733-201ENSMUST00000190232 939 ntBASIC13.09□□□□□ -0.31
Cxcl12P40224 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC13.09□□□□□ -0.31
Cxcl12P40224 Gm9463-201ENSMUST00000206707 601 ntBASIC13.09□□□□□ -0.31
Cxcl12P40224 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cxcl12P40224 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC13.09□□□□□ -0.31
Cxcl12P40224 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cxcl12P40224 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cxcl12P40224 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cxcl12P40224 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cxcl12P40224 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cxcl12P40224 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cxcl12P40224 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cxcl12P40224 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cxcl12P40224 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cxcl12P40224 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cxcl12P40224 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cxcl12P40224 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cxcl12P40224 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cxcl12P40224 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.08□□□□□ -0.31
Cxcl12P40224 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cxcl12P40224 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cxcl12P40224 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Cxcl12P40224 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cxcl12P40224 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cxcl12P40224 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
Cxcl12P40224 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.31
Cxcl12P40224 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl12P40224 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl12P40224 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl12P40224 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl12P40224 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl12P40224 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl12P40224 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl12P40224 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl12P40224 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl12P40224 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl12P40224 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Cxcl12P40224 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl12P40224 Gm11989-201ENSMUST00000117240 672 ntBASIC13.08□□□□□ -0.32
Cxcl12P40224 Gm11362-201ENSMUST00000118838 850 ntBASIC13.08□□□□□ -0.32
Cxcl12P40224 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.08□□□□□ -0.32
Cxcl12P40224 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC13.08□□□□□ -0.32
Cxcl12P40224 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC13.08□□□□□ -0.32
Cxcl12P40224 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl12P40224 Gm8492-201ENSMUST00000182375 987 ntBASIC13.08□□□□□ -0.32
Cxcl12P40224 Gm37905-201ENSMUST00000195310 341 ntBASIC13.08□□□□□ -0.32
Cxcl12P40224 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.32
Cxcl12P40224 Gm42682-201ENSMUST00000198349 1265 ntBASIC13.08□□□□□ -0.32
Cxcl12P40224 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Cxcl12P40224 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl12P40224 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl12P40224 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC13.08□□□□□ -0.32
Cxcl12P40224 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.08□□□□□ -0.32
Cxcl12P40224 AC174797.2-202ENSMUST00000225729 568 ntBASIC13.08□□□□□ -0.32
Cxcl12P40224 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl12P40224 Gm9996-201ENSMUST00000070359 913 ntBASIC13.08□□□□□ -0.32
Cxcl12P40224 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC13.08□□□□□ -0.32
Cxcl12P40224 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl12P40224 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Cxcl12P40224 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Cxcl12P40224 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl12P40224 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl12P40224 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl12P40224 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl12P40224 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl12P40224 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl12P40224 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl12P40224 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl12P40224 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl12P40224 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl12P40224 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Cxcl12P40224 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl12P40224 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl12P40224 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.08□□□□□ -0.32
Cxcl12P40224 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC13.07□□□□□ -0.32
Cxcl12P40224 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.07□□□□□ -0.32
Cxcl12P40224 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl12P40224 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Cxcl12P40224 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl12P40224 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl12P40224 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Cxcl12P40224 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl12P40224 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.07□□□□□ -0.32
Cxcl12P40224 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl12P40224 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl12P40224 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Cxcl12P40224 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl12P40224 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl12P40224 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Cxcl12P40224 Gm23596-201ENSMUST00000104304 132 ntBASIC13.07□□□□□ -0.32
Cxcl12P40224 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC13.07□□□□□ -0.32
Cxcl12P40224 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms