Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Slc6a11P31650 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slc6a11P31650 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.16□□□□□ -0.46
Slc6a11P31650 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slc6a11P31650 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Slc6a11P31650 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.16□□□□□ -0.46
Slc6a11P31650 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Slc6a11P31650 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.16□□□□□ -0.46
Slc6a11P31650 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.16□□□□□ -0.46
Slc6a11P31650 Gm2495-201ENSMUST00000191160 466 ntBASIC12.16□□□□□ -0.46
Slc6a11P31650 Gm7287-201ENSMUST00000205267 602 ntBASIC12.16□□□□□ -0.46
Slc6a11P31650 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slc6a11P31650 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slc6a11P31650 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.16□□□□□ -0.46
Slc6a11P31650 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Slc6a11P31650 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Slc6a11P31650 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slc6a11P31650 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slc6a11P31650 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.16□□□□□ -0.46
Slc6a11P31650 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slc6a11P31650 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.16□□□□□ -0.46
Slc6a11P31650 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Slc6a11P31650 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Slc6a11P31650 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Slc6a11P31650 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Slc6a11P31650 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slc6a11P31650 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Slc6a11P31650 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a11P31650 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a11P31650 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a11P31650 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a11P31650 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a11P31650 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a11P31650 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.15□□□□□ -0.46
Slc6a11P31650 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.15□□□□□ -0.46
Slc6a11P31650 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a11P31650 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.15□□□□□ -0.46
Slc6a11P31650 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a11P31650 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a11P31650 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.15□□□□□ -0.46
Slc6a11P31650 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a11P31650 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.15□□□□□ -0.46
Slc6a11P31650 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a11P31650 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a11P31650 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a11P31650 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a11P31650 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Slc6a11P31650 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.15□□□□□ -0.46
Slc6a11P31650 Gm12928-201ENSMUST00000117115 573 ntBASIC12.15□□□□□ -0.46
Slc6a11P31650 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a11P31650 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.15□□□□□ -0.46
Slc6a11P31650 Gm29649-201ENSMUST00000185649 419 ntBASIC12.15□□□□□ -0.46
Slc6a11P31650 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Slc6a11P31650 Gm8463-201ENSMUST00000208573 613 ntBASIC12.15□□□□□ -0.46
Slc6a11P31650 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a11P31650 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a11P31650 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a11P31650 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a11P31650 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a11P31650 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Slc6a11P31650 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a11P31650 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a11P31650 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a11P31650 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a11P31650 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Slc6a11P31650 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a11P31650 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.15□□□□□ -0.46
Slc6a11P31650 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.15□□□□□ -0.46
Slc6a11P31650 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a11P31650 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a11P31650 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a11P31650 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a11P31650 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a11P31650 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Slc6a11P31650 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Slc6a11P31650 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Slc6a11P31650 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Slc6a11P31650 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Slc6a11P31650 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Slc6a11P31650 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Slc6a11P31650 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Slc6a11P31650 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc6a11P31650 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc6a11P31650 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc6a11P31650 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc6a11P31650 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc6a11P31650 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.14□□□□□ -0.47
Slc6a11P31650 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc6a11P31650 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc6a11P31650 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc6a11P31650 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc6a11P31650 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc6a11P31650 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Slc6a11P31650 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Slc6a11P31650 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc6a11P31650 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.14□□□□□ -0.47
Slc6a11P31650 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc6a11P31650 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc6a11P31650 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Slc6a11P31650 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms