Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.01□□□□□ -0.65
Slc6a1P31648 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.01□□□□□ -0.65
Slc6a1P31648 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Slc6a1P31648 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.01□□□□□ -0.65
Slc6a1P31648 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Slc6a1P31648 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Slc6a1P31648 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.01□□□□□ -0.65
Slc6a1P31648 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Slc6a1P31648 Gm5425-201ENSMUST00000214125 459 ntBASIC11.01□□□□□ -0.65
Slc6a1P31648 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.01□□□□□ -0.65
Slc6a1P31648 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Slc6a1P31648 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.01□□□□□ -0.65
Slc6a1P31648 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Slc6a1P31648 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Slc6a1P31648 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Slc6a1P31648 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Slc6a1P31648 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Slc6a1P31648 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.01□□□□□ -0.65
Slc6a1P31648 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.01□□□□□ -0.65
Slc6a1P31648 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Slc6a1P31648 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Slc6a1P31648 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Slc6a1P31648 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.01□□□□□ -0.65
Slc6a1P31648 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Slc6a1P31648 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Slc6a1P31648 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Slc6a1P31648 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Slc6a1P31648 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.01□□□□□ -0.65
Slc6a1P31648 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.01□□□□□ -0.65
Slc6a1P31648 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Slc6a1P31648 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Slc6a1P31648 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Slc6a1P31648 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Slc6a1P31648 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Slc6a1P31648 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Slc6a1P31648 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.01□□□□□ -0.65
Slc6a1P31648 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
Slc6a1P31648 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Slc6a1P31648 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11□□□□□ -0.65
Slc6a1P31648 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Slc6a1P31648 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Slc6a1P31648 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Slc6a1P31648 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Slc6a1P31648 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11□□□□□ -0.65
Slc6a1P31648 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11□□□□□ -0.65
Slc6a1P31648 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Slc6a1P31648 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11□□□□□ -0.65
Slc6a1P31648 Map1b-203ENSMUST00000223725 2669 ntBASIC11□□□□□ -0.65
Slc6a1P31648 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Slc6a1P31648 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11□□□□□ -0.65
Slc6a1P31648 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Slc6a1P31648 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Slc6a1P31648 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11□□□□□ -0.65
Slc6a1P31648 Gm15770-201ENSMUST00000117498 584 ntBASIC11□□□□□ -0.65
Slc6a1P31648 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11□□□□□ -0.65
Slc6a1P31648 Mir1897-201ENSMUST00000122581 272 ntBASIC11□□□□□ -0.65
Slc6a1P31648 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11□□□□□ -0.65
Slc6a1P31648 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC11□□□□□ -0.65
Slc6a1P31648 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11□□□□□ -0.65
Slc6a1P31648 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11□□□□□ -0.65
Slc6a1P31648 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Slc6a1P31648 AC121804.3-201ENSMUST00000223420 295 ntBASIC11□□□□□ -0.65
Slc6a1P31648 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Slc6a1P31648 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11□□□□□ -0.65
Slc6a1P31648 Mir125a-201ENSMUST00000083545 68 ntBASIC11□□□□□ -0.65
Slc6a1P31648 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Slc6a1P31648 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11□□□□□ -0.65
Slc6a1P31648 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Slc6a1P31648 Syt7-204ENSMUST00000223586 1344 ntBASIC11□□□□□ -0.65
Slc6a1P31648 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Slc6a1P31648 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11□□□□□ -0.65
Slc6a1P31648 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11□□□□□ -0.65
Slc6a1P31648 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11□□□□□ -0.65
Slc6a1P31648 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Slc6a1P31648 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11□□□□□ -0.65
Slc6a1P31648 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Slc6a1P31648 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Slc6a1P31648 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11□□□□□ -0.65
Slc6a1P31648 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11□□□□□ -0.65
Slc6a1P31648 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Slc6a1P31648 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Slc6a1P31648 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.99□□□□□ -0.65
Slc6a1P31648 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC10.99□□□□□ -0.65
Slc6a1P31648 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a1P31648 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a1P31648 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a1P31648 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a1P31648 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Slc6a1P31648 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a1P31648 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a1P31648 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Slc6a1P31648 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a1P31648 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a1P31648 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a1P31648 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a1P31648 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a1P31648 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a1P31648 Gm7488-201ENSMUST00000117148 684 ntBASIC10.99□□□□□ -0.65
Slc6a1P31648 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a1P31648 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms