Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Gm25261-201ENSMUST00000157416 134 ntBASIC11.85□□□□□ -0.51
Tnfrsf1bP25119 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfrsf1bP25119 Gm16379-201ENSMUST00000161469 348 ntBASIC11.85□□□□□ -0.51
Tnfrsf1bP25119 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfrsf1bP25119 Gm17420-201ENSMUST00000164753 153 ntBASIC11.85□□□□□ -0.51
Tnfrsf1bP25119 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.85□□□□□ -0.51
Tnfrsf1bP25119 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.85□□□□□ -0.51
Tnfrsf1bP25119 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.85□□□□□ -0.51
Tnfrsf1bP25119 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfrsf1bP25119 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.85□□□□□ -0.51
Tnfrsf1bP25119 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.85□□□□□ -0.51
Tnfrsf1bP25119 Gm8762-201ENSMUST00000193486 339 ntBASIC11.85□□□□□ -0.51
Tnfrsf1bP25119 Gm42660-201ENSMUST00000197733 947 ntBASIC11.85□□□□□ -0.51
Tnfrsf1bP25119 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.85□□□□□ -0.51
Tnfrsf1bP25119 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.85□□□□□ -0.51
Tnfrsf1bP25119 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.85□□□□□ -0.51
Tnfrsf1bP25119 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfrsf1bP25119 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Tnfrsf1bP25119 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfrsf1bP25119 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfrsf1bP25119 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfrsf1bP25119 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Tnfrsf1bP25119 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfrsf1bP25119 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.85□□□□□ -0.51
Tnfrsf1bP25119 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfrsf1bP25119 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfrsf1bP25119 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfrsf1bP25119 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Gm13813-201ENSMUST00000120998 787 ntBASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Gm7809-201ENSMUST00000153199 742 ntBASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Gm27572-201ENSMUST00000183702 255 ntBASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Gm19184-201ENSMUST00000196798 928 ntBASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Gm45880-201ENSMUST00000213041 853 ntBASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf1bP25119 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Tnfrsf1bP25119 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Tnfrsf1bP25119 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf1bP25119 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf1bP25119 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf1bP25119 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf1bP25119 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Tnfrsf1bP25119 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Tnfrsf1bP25119 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf1bP25119 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf1bP25119 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf1bP25119 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf1bP25119 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf1bP25119 Gm14921-201ENSMUST00000118643 908 ntBASIC11.83□□□□□ -0.52
Tnfrsf1bP25119 Gm12502-201ENSMUST00000120197 444 ntBASIC11.83□□□□□ -0.52
Tnfrsf1bP25119 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf1bP25119 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf1bP25119 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.83□□□□□ -0.52
Tnfrsf1bP25119 Gm18584-201ENSMUST00000203098 964 ntBASIC11.83□□□□□ -0.52
Tnfrsf1bP25119 AC132260.2-201ENSMUST00000224482 344 ntBASIC11.83□□□□□ -0.52
Tnfrsf1bP25119 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms