Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6bP23440 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6bP23440 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6bP23440 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Pde6bP23440 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.98□□□□□ -0.17
Pde6bP23440 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.98□□□□□ -0.17
Pde6bP23440 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6bP23440 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6bP23440 Gm13316-201ENSMUST00000140537 691 ntBASIC13.98□□□□□ -0.17
Pde6bP23440 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC13.98□□□□□ -0.17
Pde6bP23440 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.98□□□□□ -0.17
Pde6bP23440 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6bP23440 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Pde6bP23440 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6bP23440 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6bP23440 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6bP23440 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6bP23440 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6bP23440 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6bP23440 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Pde6bP23440 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6bP23440 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.98□□□□□ -0.17
Pde6bP23440 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Pde6bP23440 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6bP23440 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6bP23440 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6bP23440 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6bP23440 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6bP23440 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Pde6bP23440 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Pde6bP23440 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6bP23440 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6bP23440 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6bP23440 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6bP23440 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.97□□□□□ -0.17
Pde6bP23440 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6bP23440 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6bP23440 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6bP23440 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Pde6bP23440 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6bP23440 Gm14726-201ENSMUST00000120623 896 ntBASIC13.97□□□□□ -0.17
Pde6bP23440 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Pde6bP23440 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6bP23440 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.97□□□□□ -0.17
Pde6bP23440 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.97□□□□□ -0.17
Pde6bP23440 Gm26461-201ENSMUST00000175064 290 ntBASIC13.97□□□□□ -0.17
Pde6bP23440 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.97□□□□□ -0.17
Pde6bP23440 Gm2383-201ENSMUST00000181461 807 ntBASIC13.97□□□□□ -0.17
Pde6bP23440 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Pde6bP23440 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6bP23440 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.97□□□□□ -0.17
Pde6bP23440 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.97□□□□□ -0.17
Pde6bP23440 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.97□□□□□ -0.17
Pde6bP23440 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6bP23440 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6bP23440 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Pde6bP23440 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6bP23440 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6bP23440 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.97□□□□□ -0.17
Pde6bP23440 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.97□□□□□ -0.17
Pde6bP23440 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6bP23440 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6bP23440 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.97□□□□□ -0.17
Pde6bP23440 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6bP23440 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6bP23440 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6bP23440 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6bP23440 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Pde6bP23440 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6bP23440 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6bP23440 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.96□□□□□ -0.17
Pde6bP23440 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Pde6bP23440 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pde6bP23440 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pde6bP23440 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.96□□□□□ -0.17
Pde6bP23440 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Pde6bP23440 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Pde6bP23440 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Pde6bP23440 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pde6bP23440 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Pde6bP23440 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pde6bP23440 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pde6bP23440 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.96□□□□□ -0.17
Pde6bP23440 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Pde6bP23440 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.96□□□□□ -0.17
Pde6bP23440 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Pde6bP23440 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pde6bP23440 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.96□□□□□ -0.17
Pde6bP23440 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.96□□□□□ -0.17
Pde6bP23440 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pde6bP23440 Gm22121-201ENSMUST00000175148 54 ntBASIC13.96□□□□□ -0.17
Pde6bP23440 Gm5904-201ENSMUST00000210286 865 ntBASIC13.96□□□□□ -0.17
Pde6bP23440 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.96□□□□□ -0.17
Pde6bP23440 Gm30285-201ENSMUST00000214614 422 ntBASIC13.96□□□□□ -0.17
Pde6bP23440 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pde6bP23440 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Pde6bP23440 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Pde6bP23440 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pde6bP23440 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pde6bP23440 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms