Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cntn1P12960 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cntn1P12960 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cntn1P12960 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cntn1P12960 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.27□□□□□ -0.44
Cntn1P12960 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cntn1P12960 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.27□□□□□ -0.45
Cntn1P12960 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cntn1P12960 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.27□□□□□ -0.45
Cntn1P12960 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.27□□□□□ -0.45
Cntn1P12960 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.27□□□□□ -0.45
Cntn1P12960 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Cntn1P12960 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.27□□□□□ -0.45
Cntn1P12960 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.27□□□□□ -0.45
Cntn1P12960 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cntn1P12960 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.27□□□□□ -0.45
Cntn1P12960 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cntn1P12960 Gm3961-201ENSMUST00000204425 994 ntBASIC12.27□□□□□ -0.45
Cntn1P12960 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.27□□□□□ -0.45
Cntn1P12960 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cntn1P12960 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cntn1P12960 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cntn1P12960 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cntn1P12960 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cntn1P12960 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cntn1P12960 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cntn1P12960 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cntn1P12960 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Cntn1P12960 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cntn1P12960 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cntn1P12960 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cntn1P12960 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cntn1P12960 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cntn1P12960 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Cntn1P12960 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn1P12960 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn1P12960 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.26□□□□□ -0.45
Cntn1P12960 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Cntn1P12960 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn1P12960 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn1P12960 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn1P12960 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn1P12960 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn1P12960 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn1P12960 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn1P12960 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn1P12960 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn1P12960 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn1P12960 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn1P12960 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn1P12960 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn1P12960 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn1P12960 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn1P12960 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn1P12960 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn1P12960 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.26□□□□□ -0.45
Cntn1P12960 Gm4986-201ENSMUST00000119731 549 ntBASIC12.26□□□□□ -0.45
Cntn1P12960 Gm13297-201ENSMUST00000120205 934 ntBASIC12.26□□□□□ -0.45
Cntn1P12960 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.26□□□□□ -0.45
Cntn1P12960 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn1P12960 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.26□□□□□ -0.45
Cntn1P12960 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.26□□□□□ -0.45
Cntn1P12960 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cntn1P12960 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Cntn1P12960 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn1P12960 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.26□□□□□ -0.45
Cntn1P12960 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Cntn1P12960 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.26□□□□□ -0.45
Cntn1P12960 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.26□□□□□ -0.45
Cntn1P12960 Gm7046-201ENSMUST00000221351 977 ntBASIC12.26□□□□□ -0.45
Cntn1P12960 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.26□□□□□ -0.45
Cntn1P12960 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn1P12960 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn1P12960 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn1P12960 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn1P12960 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn1P12960 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.26□□□□□ -0.45
Cntn1P12960 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Cntn1P12960 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn1P12960 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.26□□□□□ -0.45
Cntn1P12960 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cntn1P12960 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn1P12960 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Cntn1P12960 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.26□□□□□ -0.45
Cntn1P12960 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn1P12960 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn1P12960 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn1P12960 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn1P12960 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn1P12960 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn1P12960 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn1P12960 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn1P12960 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn1P12960 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cntn1P12960 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn1P12960 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn1P12960 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn1P12960 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn1P12960 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cntn1P12960 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 107.8 ms