Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.94□□□□□ -0.18
Chmp6P0C0A3 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp6P0C0A3 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Chmp6P0C0A3 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Chmp6P0C0A3 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp6P0C0A3 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp6P0C0A3 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.93□□□□□ -0.18
Chmp6P0C0A3 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp6P0C0A3 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp6P0C0A3 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Chmp6P0C0A3 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Chmp6P0C0A3 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp6P0C0A3 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp6P0C0A3 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Chmp6P0C0A3 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp6P0C0A3 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Chmp6P0C0A3 Gm13226-201ENSMUST00000117838 404 ntBASIC13.93□□□□□ -0.18
Chmp6P0C0A3 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.93□□□□□ -0.18
Chmp6P0C0A3 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp6P0C0A3 Gm45784-201ENSMUST00000188360 142 ntBASIC13.93□□□□□ -0.18
Chmp6P0C0A3 Gm28693-202ENSMUST00000190758 331 ntBASIC13.93□□□□□ -0.18
Chmp6P0C0A3 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.93□□□□□ -0.18
Chmp6P0C0A3 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.93□□□□□ -0.18
Chmp6P0C0A3 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp6P0C0A3 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Chmp6P0C0A3 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp6P0C0A3 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp6P0C0A3 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp6P0C0A3 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp6P0C0A3 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp6P0C0A3 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp6P0C0A3 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.93□□□□□ -0.18
Chmp6P0C0A3 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Chmp6P0C0A3 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp6P0C0A3 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp6P0C0A3 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.93□□□□□ -0.18
Chmp6P0C0A3 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Chmp6P0C0A3 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp6P0C0A3 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp6P0C0A3 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp6P0C0A3 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp6P0C0A3 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp6P0C0A3 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp6P0C0A3 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp6P0C0A3 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp6P0C0A3 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp6P0C0A3 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp6P0C0A3 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp6P0C0A3 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp6P0C0A3 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp6P0C0A3 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.92□□□□□ -0.18
Chmp6P0C0A3 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp6P0C0A3 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp6P0C0A3 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp6P0C0A3 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
Chmp6P0C0A3 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.92□□□□□ -0.18
Chmp6P0C0A3 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Chmp6P0C0A3 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp6P0C0A3 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp6P0C0A3 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Chmp6P0C0A3 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp6P0C0A3 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.92□□□□□ -0.18
Chmp6P0C0A3 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Chmp6P0C0A3 Gm1335-201ENSMUST00000121653 386 ntBASIC13.92□□□□□ -0.18
Chmp6P0C0A3 Gm16479-201ENSMUST00000121706 932 ntBASIC13.92□□□□□ -0.18
Chmp6P0C0A3 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.92□□□□□ -0.18
Chmp6P0C0A3 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp6P0C0A3 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.92□□□□□ -0.18
Chmp6P0C0A3 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.92□□□□□ -0.18
Chmp6P0C0A3 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp6P0C0A3 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp6P0C0A3 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp6P0C0A3 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp6P0C0A3 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp6P0C0A3 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Chmp6P0C0A3 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp6P0C0A3 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.92□□□□□ -0.18
Chmp6P0C0A3 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Chmp6P0C0A3 Pck2-205ENSMUST00000226352 2784 ntBASIC13.92□□□□□ -0.18
Chmp6P0C0A3 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp6P0C0A3 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp6P0C0A3 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp6P0C0A3 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp6P0C0A3 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp6P0C0A3 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.91□□□□□ -0.18
Chmp6P0C0A3 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms