Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.54□□□□□ -0.24
TnfP06804 Gm25043-201ENSMUST00000158604 212 ntBASIC13.54□□□□□ -0.24
TnfP06804 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TnfP06804 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.54□□□□□ -0.24
TnfP06804 Gm37201-201ENSMUST00000191845 523 ntBASIC13.54□□□□□ -0.24
TnfP06804 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.54□□□□□ -0.24
TnfP06804 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.54□□□□□ -0.24
TnfP06804 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TnfP06804 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TnfP06804 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TnfP06804 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TnfP06804 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.54□□□□□ -0.24
TnfP06804 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.54□□□□□ -0.24
TnfP06804 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
TnfP06804 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TnfP06804 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
TnfP06804 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
TnfP06804 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TnfP06804 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TnfP06804 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TnfP06804 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TnfP06804 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TnfP06804 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TnfP06804 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.53□□□□□ -0.24
TnfP06804 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
TnfP06804 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TnfP06804 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TnfP06804 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TnfP06804 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.53□□□□□ -0.24
TnfP06804 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TnfP06804 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.53□□□□□ -0.24
TnfP06804 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TnfP06804 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
TnfP06804 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.53□□□□□ -0.24
TnfP06804 Gm18056-201ENSMUST00000207670 568 ntBASIC13.53□□□□□ -0.24
TnfP06804 Gm18061-201ENSMUST00000208350 562 ntBASIC13.53□□□□□ -0.24
TnfP06804 Gm18063-201ENSMUST00000208529 568 ntBASIC13.53□□□□□ -0.24
TnfP06804 Gm18052-201ENSMUST00000208750 559 ntBASIC13.53□□□□□ -0.24
TnfP06804 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TnfP06804 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.53□□□□□ -0.24
TnfP06804 AC093022.1-201ENSMUST00000226949 1072 ntBASIC13.53□□□□□ -0.24
TnfP06804 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TnfP06804 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
TnfP06804 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.53□□□□□ -0.24
TnfP06804 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TnfP06804 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TnfP06804 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TnfP06804 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TnfP06804 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TnfP06804 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TnfP06804 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TnfP06804 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TnfP06804 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TnfP06804 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
TnfP06804 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TnfP06804 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TnfP06804 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TnfP06804 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.52□□□□□ -0.24
TnfP06804 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TnfP06804 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
TnfP06804 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
TnfP06804 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TnfP06804 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
TnfP06804 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
TnfP06804 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.52□□□□□ -0.24
TnfP06804 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TnfP06804 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
TnfP06804 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.52□□□□□ -0.24
TnfP06804 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.52□□□□□ -0.25
TnfP06804 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TnfP06804 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
TnfP06804 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TnfP06804 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.52□□□□□ -0.25
TnfP06804 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.25
TnfP06804 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TnfP06804 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
TnfP06804 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
TnfP06804 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TnfP06804 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TnfP06804 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TnfP06804 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.52□□□□□ -0.25
TnfP06804 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TnfP06804 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TnfP06804 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TnfP06804 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TnfP06804 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TnfP06804 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TnfP06804 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TnfP06804 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TnfP06804 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
TnfP06804 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TnfP06804 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
TnfP06804 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TnfP06804 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TnfP06804 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TnfP06804 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TnfP06804 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TnfP06804 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TnfP06804 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TnfP06804 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms