Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P06344 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
P06344 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P06344 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
P06344 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P06344 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P06344 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
P06344 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P06344 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
P06344 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
P06344 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
P06344 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
P06344 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
P06344 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
P06344 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
P06344 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
P06344 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P06344 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P06344 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.39□□□□□ -0.59
P06344 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P06344 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.39□□□□□ -0.59
P06344 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P06344 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
P06344 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.39□□□□□ -0.59
P06344 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
P06344 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
P06344 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
P06344 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P06344 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P06344 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P06344 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.39□□□□□ -0.59
P06344 Gm27501-201ENSMUST00000183599 107 ntBASIC11.39□□□□□ -0.59
P06344 Gm43179-201ENSMUST00000198797 275 ntBASIC11.39□□□□□ -0.59
P06344 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.39□□□□□ -0.59
P06344 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P06344 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P06344 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.39□□□□□ -0.59
P06344 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.39□□□□□ -0.59
P06344 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
P06344 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P06344 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P06344 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
P06344 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
P06344 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P06344 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.39□□□□□ -0.59
P06344 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P06344 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
P06344 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
P06344 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
P06344 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.39□□□□□ -0.59
P06344 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P06344 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
P06344 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.38□□□□□ -0.59
P06344 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P06344 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
P06344 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
P06344 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
P06344 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P06344 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.38□□□□□ -0.59
P06344 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P06344 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
P06344 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
P06344 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P06344 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P06344 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P06344 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P06344 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
P06344 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P06344 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P06344 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P06344 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
P06344 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
P06344 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P06344 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
P06344 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
P06344 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.38□□□□□ -0.59
P06344 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.38□□□□□ -0.59
P06344 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.38□□□□□ -0.59
P06344 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P06344 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P06344 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.38□□□□□ -0.59
P06344 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.38□□□□□ -0.59
P06344 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.38□□□□□ -0.59
P06344 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.38□□□□□ -0.59
P06344 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.38□□□□□ -0.59
P06344 Gm29396-201ENSMUST00000185659 716 ntBASIC11.38□□□□□ -0.59
P06344 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.38□□□□□ -0.59
P06344 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.38□□□□□ -0.59
P06344 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.38□□□□□ -0.59
P06344 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P06344 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.38□□□□□ -0.59
P06344 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P06344 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P06344 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.38□□□□□ -0.59
P06344 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
P06344 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.38□□□□□ -0.59
P06344 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
P06344 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
P06344 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
P06344 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms