Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.24□□□□□ -0.45
P04213 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04213 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04213 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04213 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04213 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04213 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04213 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
P04213 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04213 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04213 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04213 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
P04213 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P04213 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04213 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04213 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.23□□□□□ -0.45
P04213 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04213 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04213 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P04213 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04213 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04213 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04213 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04213 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
P04213 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.23□□□□□ -0.45
P04213 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04213 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04213 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04213 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
P04213 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
P04213 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.23□□□□□ -0.45
P04213 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04213 Gm11637-201ENSMUST00000120601 592 ntBASIC12.23□□□□□ -0.45
P04213 Gm15806-201ENSMUST00000120696 955 ntBASIC12.23□□□□□ -0.45
P04213 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.23□□□□□ -0.45
P04213 Gm2231-201ENSMUST00000125661 612 ntBASIC12.23□□□□□ -0.45
P04213 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P04213 Gm9002-201ENSMUST00000178437 499 ntBASIC12.23□□□□□ -0.45
P04213 Gm7561-201ENSMUST00000211203 886 ntBASIC12.23□□□□□ -0.45
P04213 Gm29705-201ENSMUST00000212598 474 ntBASIC12.23□□□□□ -0.45
P04213 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.23□□□□□ -0.45
P04213 Gm26035-201ENSMUST00000083065 308 ntBASIC12.23□□□□□ -0.45
P04213 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04213 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04213 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04213 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
P04213 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04213 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04213 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04213 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04213 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.23□□□□□ -0.45
P04213 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04213 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.23□□□□□ -0.45
P04213 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04213 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
P04213 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04213 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04213 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04213 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P04213 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04213 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04213 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04213 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
P04213 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P04213 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P04213 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.22□□□□□ -0.45
P04213 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
P04213 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.22□□□□□ -0.45
P04213 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P04213 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P04213 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04213 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04213 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.22□□□□□ -0.45
P04213 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.22□□□□□ -0.45
P04213 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.22□□□□□ -0.45
P04213 Gm27839-201ENSMUST00000184242 106 ntBASIC12.22□□□□□ -0.45
P04213 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.22□□□□□ -0.45
P04213 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.22□□□□□ -0.45
P04213 Gm17794-201ENSMUST00000220252 955 ntBASIC12.22□□□□□ -0.45
P04213 Gm6091-201ENSMUST00000098307 165 ntBASIC12.22□□□□□ -0.45
P04213 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04213 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
P04213 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04213 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04213 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04213 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04213 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
P04213 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
P04213 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04213 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.22□□□□□ -0.45
P04213 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04213 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04213 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04213 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04213 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04213 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P04213 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
P04213 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
P04213 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
P04213 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms