Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krt1P04104 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.06□□□□□ -0.48
Krt1P04104 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Krt1P04104 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Krt1P04104 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krt1P04104 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krt1P04104 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krt1P04104 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krt1P04104 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Krt1P04104 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Krt1P04104 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krt1P04104 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.05□□□□□ -0.48
Krt1P04104 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krt1P04104 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krt1P04104 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krt1P04104 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krt1P04104 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Krt1P04104 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Krt1P04104 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Krt1P04104 Gm25287-201ENSMUST00000103846 110 ntBASIC12.05□□□□□ -0.48
Krt1P04104 Gm22918-201ENSMUST00000103855 110 ntBASIC12.05□□□□□ -0.48
Krt1P04104 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krt1P04104 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Krt1P04104 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Krt1P04104 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.05□□□□□ -0.48
Krt1P04104 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.05□□□□□ -0.48
Krt1P04104 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.05□□□□□ -0.48
Krt1P04104 Gm18733-201ENSMUST00000173950 856 ntBASIC12.05□□□□□ -0.48
Krt1P04104 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krt1P04104 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.05□□□□□ -0.48
Krt1P04104 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.05□□□□□ -0.48
Krt1P04104 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Krt1P04104 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Krt1P04104 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krt1P04104 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Krt1P04104 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krt1P04104 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Krt1P04104 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Krt1P04104 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krt1P04104 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Krt1P04104 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krt1P04104 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Krt1P04104 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Krt1P04104 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.05□□□□□ -0.48
Krt1P04104 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.05□□□□□ -0.48
Krt1P04104 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Krt1P04104 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krt1P04104 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krt1P04104 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Krt1P04104 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Krt1P04104 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.05□□□□□ -0.48
Krt1P04104 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt1P04104 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt1P04104 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Krt1P04104 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt1P04104 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt1P04104 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.04□□□□□ -0.48
Krt1P04104 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt1P04104 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt1P04104 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt1P04104 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Krt1P04104 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt1P04104 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Krt1P04104 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt1P04104 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt1P04104 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt1P04104 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt1P04104 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt1P04104 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt1P04104 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt1P04104 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Krt1P04104 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.04□□□□□ -0.48
Krt1P04104 Mir3113-201ENSMUST00000175478 76 ntBASIC12.04□□□□□ -0.48
Krt1P04104 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.04□□□□□ -0.48
Krt1P04104 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.04□□□□□ -0.48
Krt1P04104 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt1P04104 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt1P04104 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt1P04104 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt1P04104 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt1P04104 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt1P04104 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt1P04104 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt1P04104 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Krt1P04104 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Krt1P04104 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Krt1P04104 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt1P04104 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.04□□□□□ -0.48
Krt1P04104 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt1P04104 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt1P04104 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt1P04104 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt1P04104 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Krt1P04104 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt1P04104 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt1P04104 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Krt1P04104 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.03□□□□□ -0.48
Krt1P04104 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt1P04104 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Krt1P04104 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms