Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hoxa3P02831 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hoxa3P02831 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Hoxa3P02831 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Hoxa3P02831 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hoxa3P02831 Gm8793-201ENSMUST00000183069 1303 ntBASIC10.74□□□□□ -0.69
Hoxa3P02831 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hoxa3P02831 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Hoxa3P02831 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Hoxa3P02831 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Hoxa3P02831 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Hoxa3P02831 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hoxa3P02831 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hoxa3P02831 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hoxa3P02831 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC10.74□□□□□ -0.69
Hoxa3P02831 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hoxa3P02831 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hoxa3P02831 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hoxa3P02831 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hoxa3P02831 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
Hoxa3P02831 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Hoxa3P02831 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hoxa3P02831 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hoxa3P02831 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Hoxa3P02831 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Hoxa3P02831 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hoxa3P02831 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hoxa3P02831 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC10.73□□□□□ -0.69
Hoxa3P02831 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Hoxa3P02831 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hoxa3P02831 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC10.73□□□□□ -0.69
Hoxa3P02831 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hoxa3P02831 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Hoxa3P02831 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC10.73□□□□□ -0.69
Hoxa3P02831 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Hoxa3P02831 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC10.73□□□□□ -0.69
Hoxa3P02831 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.73□□□□□ -0.69
Hoxa3P02831 Gm16379-201ENSMUST00000161469 348 ntBASIC10.73□□□□□ -0.69
Hoxa3P02831 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC10.73□□□□□ -0.69
Hoxa3P02831 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Hoxa3P02831 Gm3890-201ENSMUST00000182416 207 ntBASIC10.73□□□□□ -0.69
Hoxa3P02831 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Hoxa3P02831 Gm8762-201ENSMUST00000193486 339 ntBASIC10.73□□□□□ -0.69
Hoxa3P02831 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC10.73□□□□□ -0.69
Hoxa3P02831 Olfr284-202ENSMUST00000206647 966 ntBASIC10.73□□□□□ -0.69
Hoxa3P02831 Gm7172-201ENSMUST00000218047 1152 ntBASIC10.73□□□□□ -0.69
Hoxa3P02831 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC10.73□□□□□ -0.69
Hoxa3P02831 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hoxa3P02831 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Hoxa3P02831 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Hoxa3P02831 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Hoxa3P02831 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hoxa3P02831 Gm6203-201ENSMUST00000209575 1342 ntBASIC10.73□□□□□ -0.69
Hoxa3P02831 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hoxa3P02831 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hoxa3P02831 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hoxa3P02831 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hoxa3P02831 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Hoxa3P02831 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC10.73□□□□□ -0.69
Hoxa3P02831 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hoxa3P02831 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hoxa3P02831 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
Hoxa3P02831 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Hoxa3P02831 AC154747.3-201ENSMUST00000224471 3470 ntBASIC10.72□□□□□ -0.69
Hoxa3P02831 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa3P02831 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa3P02831 Gm5466-201ENSMUST00000119395 1890 ntBASIC10.72□□□□□ -0.69
Hoxa3P02831 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa3P02831 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa3P02831 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa3P02831 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa3P02831 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa3P02831 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa3P02831 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa3P02831 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Hoxa3P02831 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC10.72□□□□□ -0.69
Hoxa3P02831 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa3P02831 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Hoxa3P02831 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Hoxa3P02831 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa3P02831 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa3P02831 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa3P02831 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.72□□□□□ -0.69
Hoxa3P02831 Gm26185-201ENSMUST00000157692 266 ntBASIC10.72□□□□□ -0.69
Hoxa3P02831 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa3P02831 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa3P02831 Gm37042-201ENSMUST00000193816 581 ntBASIC10.72□□□□□ -0.69
Hoxa3P02831 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.72□□□□□ -0.69
Hoxa3P02831 Gm4768-201ENSMUST00000206199 686 ntBASIC10.72□□□□□ -0.69
Hoxa3P02831 Gm6458-201ENSMUST00000211573 635 ntBASIC10.72□□□□□ -0.69
Hoxa3P02831 Gm32025-201ENSMUST00000217960 307 ntBASIC10.72□□□□□ -0.69
Hoxa3P02831 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa3P02831 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa3P02831 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa3P02831 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa3P02831 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa3P02831 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa3P02831 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Hoxa3P02831 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa3P02831 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms