Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.37□□□□□ -0.59
Col5a1O88207 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col5a1O88207 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col5a1O88207 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col5a1O88207 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col5a1O88207 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col5a1O88207 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.36□□□□□ -0.59
Col5a1O88207 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col5a1O88207 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col5a1O88207 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col5a1O88207 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.36□□□□□ -0.59
Col5a1O88207 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.36□□□□□ -0.59
Col5a1O88207 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col5a1O88207 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col5a1O88207 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col5a1O88207 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Col5a1O88207 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col5a1O88207 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col5a1O88207 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Col5a1O88207 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col5a1O88207 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Col5a1O88207 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.36□□□□□ -0.59
Col5a1O88207 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC11.36□□□□□ -0.59
Col5a1O88207 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.36□□□□□ -0.59
Col5a1O88207 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.36□□□□□ -0.59
Col5a1O88207 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Col5a1O88207 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col5a1O88207 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.36□□□□□ -0.59
Col5a1O88207 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.36□□□□□ -0.59
Col5a1O88207 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col5a1O88207 Gm25072-201ENSMUST00000175233 235 ntBASIC11.36□□□□□ -0.59
Col5a1O88207 Gm9358-201ENSMUST00000183067 927 ntBASIC11.36□□□□□ -0.59
Col5a1O88207 Gm29615-201ENSMUST00000185371 697 ntBASIC11.36□□□□□ -0.59
Col5a1O88207 Gm28224-201ENSMUST00000186078 697 ntBASIC11.36□□□□□ -0.59
Col5a1O88207 Gm29001-201ENSMUST00000186177 697 ntBASIC11.36□□□□□ -0.59
Col5a1O88207 Gm28292-201ENSMUST00000186593 697 ntBASIC11.36□□□□□ -0.59
Col5a1O88207 Gm28101-201ENSMUST00000187608 697 ntBASIC11.36□□□□□ -0.59
Col5a1O88207 Gm29076-201ENSMUST00000187689 697 ntBASIC11.36□□□□□ -0.59
Col5a1O88207 Gm28302-201ENSMUST00000187931 697 ntBASIC11.36□□□□□ -0.59
Col5a1O88207 Gm28646-201ENSMUST00000188220 697 ntBASIC11.36□□□□□ -0.59
Col5a1O88207 Gm9230-201ENSMUST00000188228 532 ntBASIC11.36□□□□□ -0.59
Col5a1O88207 Gm28205-201ENSMUST00000189177 697 ntBASIC11.36□□□□□ -0.59
Col5a1O88207 Gm29032-201ENSMUST00000189797 697 ntBASIC11.36□□□□□ -0.59
Col5a1O88207 Gm28695-201ENSMUST00000190300 697 ntBASIC11.36□□□□□ -0.59
Col5a1O88207 Gm37448-201ENSMUST00000192795 697 ntBASIC11.36□□□□□ -0.59
Col5a1O88207 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col5a1O88207 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC11.36□□□□□ -0.59
Col5a1O88207 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col5a1O88207 Gm1821-202ENSMUST00000227415 750 ntBASIC11.36□□□□□ -0.59
Col5a1O88207 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col5a1O88207 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col5a1O88207 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col5a1O88207 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Col5a1O88207 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.36□□□□□ -0.59
Col5a1O88207 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col5a1O88207 Gm10710-201ENSMUST00000047876 3971 ntBASIC11.36□□□□□ -0.59
Col5a1O88207 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col5a1O88207 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col5a1O88207 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col5a1O88207 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.36□□□□□ -0.59
Col5a1O88207 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col5a1O88207 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Col5a1O88207 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col5a1O88207 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col5a1O88207 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col5a1O88207 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col5a1O88207 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Col5a1O88207 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col5a1O88207 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col5a1O88207 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col5a1O88207 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col5a1O88207 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.36□□□□□ -0.59
Col5a1O88207 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.35□□□□□ -0.59
Col5a1O88207 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col5a1O88207 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col5a1O88207 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.35□□□□□ -0.59
Col5a1O88207 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col5a1O88207 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col5a1O88207 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col5a1O88207 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col5a1O88207 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col5a1O88207 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Col5a1O88207 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.35□□□□□ -0.59
Col5a1O88207 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC11.35□□□□□ -0.59
Col5a1O88207 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.35□□□□□ -0.59
Col5a1O88207 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Col5a1O88207 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.35□□□□□ -0.59
Col5a1O88207 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.35□□□□□ -0.59
Col5a1O88207 Gm28882-201ENSMUST00000185504 314 ntBASIC11.35□□□□□ -0.59
Col5a1O88207 Gm17827-201ENSMUST00000211825 742 ntBASIC11.35□□□□□ -0.59
Col5a1O88207 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.35□□□□□ -0.59
Col5a1O88207 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col5a1O88207 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col5a1O88207 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.35□□□□□ -0.59
Col5a1O88207 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col5a1O88207 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col5a1O88207 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col5a1O88207 Gm3765-201ENSMUST00000130985 1447 ntBASIC11.35□□□□□ -0.59
Col5a1O88207 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.35□□□□□ -0.59
Col5a1O88207 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms