Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim1O70400 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim1O70400 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim1O70400 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Pdlim1O70400 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim1O70400 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.66□□□□□ -0.38
Pdlim1O70400 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim1O70400 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim1O70400 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.66□□□□□ -0.38
Pdlim1O70400 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim1O70400 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim1O70400 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Pdlim1O70400 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdlim1O70400 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdlim1O70400 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Pdlim1O70400 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.65□□□□□ -0.38
Pdlim1O70400 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdlim1O70400 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.65□□□□□ -0.38
Pdlim1O70400 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pdlim1O70400 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pdlim1O70400 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Pdlim1O70400 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdlim1O70400 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pdlim1O70400 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Pdlim1O70400 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdlim1O70400 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pdlim1O70400 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.65□□□□□ -0.38
Pdlim1O70400 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pdlim1O70400 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.65□□□□□ -0.38
Pdlim1O70400 Gm12957-201ENSMUST00000117835 377 ntBASIC12.65□□□□□ -0.38
Pdlim1O70400 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.65□□□□□ -0.38
Pdlim1O70400 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.65□□□□□ -0.38
Pdlim1O70400 Gm7809-201ENSMUST00000153199 742 ntBASIC12.65□□□□□ -0.38
Pdlim1O70400 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.65□□□□□ -0.38
Pdlim1O70400 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.65□□□□□ -0.38
Pdlim1O70400 Gm3890-201ENSMUST00000182416 207 ntBASIC12.65□□□□□ -0.38
Pdlim1O70400 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.65□□□□□ -0.38
Pdlim1O70400 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.65□□□□□ -0.38
Pdlim1O70400 Gm19184-201ENSMUST00000196798 928 ntBASIC12.65□□□□□ -0.38
Pdlim1O70400 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.65□□□□□ -0.38
Pdlim1O70400 Gm19309-201ENSMUST00000218295 205 ntBASIC12.65□□□□□ -0.38
Pdlim1O70400 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.65□□□□□ -0.38
Pdlim1O70400 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdlim1O70400 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdlim1O70400 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Pdlim1O70400 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pdlim1O70400 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Pdlim1O70400 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.65□□□□□ -0.38
Pdlim1O70400 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.65□□□□□ -0.38
Pdlim1O70400 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pdlim1O70400 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pdlim1O70400 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdlim1O70400 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdlim1O70400 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdlim1O70400 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.39
Pdlim1O70400 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pdlim1O70400 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
Pdlim1O70400 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pdlim1O70400 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Pdlim1O70400 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Pdlim1O70400 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Pdlim1O70400 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.65□□□□□ -0.39
Pdlim1O70400 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.65□□□□□ -0.39
Pdlim1O70400 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pdlim1O70400 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Pdlim1O70400 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Pdlim1O70400 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pdlim1O70400 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.64□□□□□ -0.39
Pdlim1O70400 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pdlim1O70400 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.64□□□□□ -0.39
Pdlim1O70400 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pdlim1O70400 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pdlim1O70400 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pdlim1O70400 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.64□□□□□ -0.39
Pdlim1O70400 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pdlim1O70400 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pdlim1O70400 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.64□□□□□ -0.39
Pdlim1O70400 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pdlim1O70400 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.64□□□□□ -0.39
Pdlim1O70400 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Pdlim1O70400 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.64□□□□□ -0.39
Pdlim1O70400 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.64□□□□□ -0.39
Pdlim1O70400 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pdlim1O70400 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.64□□□□□ -0.39
Pdlim1O70400 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pdlim1O70400 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pdlim1O70400 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pdlim1O70400 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pdlim1O70400 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.64□□□□□ -0.39
Pdlim1O70400 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pdlim1O70400 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.64□□□□□ -0.39
Pdlim1O70400 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.64□□□□□ -0.39
Pdlim1O70400 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pdlim1O70400 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pdlim1O70400 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pdlim1O70400 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.64□□□□□ -0.39
Pdlim1O70400 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.64□□□□□ -0.39
Pdlim1O70400 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pdlim1O70400 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pdlim1O70400 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms