Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.03□□□□□ -0.16
Trdmt1O55055 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdmt1O55055 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdmt1O55055 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.03□□□□□ -0.16
Trdmt1O55055 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdmt1O55055 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdmt1O55055 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdmt1O55055 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdmt1O55055 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trdmt1O55055 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trdmt1O55055 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trdmt1O55055 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trdmt1O55055 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trdmt1O55055 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Trdmt1O55055 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trdmt1O55055 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trdmt1O55055 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.02□□□□□ -0.16
Trdmt1O55055 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trdmt1O55055 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trdmt1O55055 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trdmt1O55055 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trdmt1O55055 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Trdmt1O55055 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trdmt1O55055 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trdmt1O55055 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trdmt1O55055 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trdmt1O55055 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trdmt1O55055 AU022133-201ENSMUST00000200601 873 ntBASIC14.02□□□□□ -0.17
Trdmt1O55055 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trdmt1O55055 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trdmt1O55055 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trdmt1O55055 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trdmt1O55055 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
Trdmt1O55055 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trdmt1O55055 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trdmt1O55055 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14.02□□□□□ -0.17
Trdmt1O55055 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Trdmt1O55055 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trdmt1O55055 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trdmt1O55055 Gm44401-201ENSMUST00000204462 2375 ntBASIC14.02□□□□□ -0.17
Trdmt1O55055 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trdmt1O55055 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.02□□□□□ -0.17
Trdmt1O55055 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trdmt1O55055 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.02□□□□□ -0.17
Trdmt1O55055 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trdmt1O55055 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trdmt1O55055 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trdmt1O55055 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trdmt1O55055 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdmt1O55055 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdmt1O55055 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdmt1O55055 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdmt1O55055 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trdmt1O55055 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdmt1O55055 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdmt1O55055 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trdmt1O55055 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdmt1O55055 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.01□□□□□ -0.17
Trdmt1O55055 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trdmt1O55055 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdmt1O55055 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trdmt1O55055 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trdmt1O55055 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Trdmt1O55055 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdmt1O55055 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC14.01□□□□□ -0.17
Trdmt1O55055 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC14.01□□□□□ -0.17
Trdmt1O55055 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC14.01□□□□□ -0.17
Trdmt1O55055 Gm29615-201ENSMUST00000185371 697 ntBASIC14.01□□□□□ -0.17
Trdmt1O55055 Gm28224-201ENSMUST00000186078 697 ntBASIC14.01□□□□□ -0.17
Trdmt1O55055 Gm29001-201ENSMUST00000186177 697 ntBASIC14.01□□□□□ -0.17
Trdmt1O55055 Gm28292-201ENSMUST00000186593 697 ntBASIC14.01□□□□□ -0.17
Trdmt1O55055 Gm28101-201ENSMUST00000187608 697 ntBASIC14.01□□□□□ -0.17
Trdmt1O55055 Gm29076-201ENSMUST00000187689 697 ntBASIC14.01□□□□□ -0.17
Trdmt1O55055 Gm28302-201ENSMUST00000187931 697 ntBASIC14.01□□□□□ -0.17
Trdmt1O55055 Gm28646-201ENSMUST00000188220 697 ntBASIC14.01□□□□□ -0.17
Trdmt1O55055 Gm28205-201ENSMUST00000189177 697 ntBASIC14.01□□□□□ -0.17
Trdmt1O55055 Gm29032-201ENSMUST00000189797 697 ntBASIC14.01□□□□□ -0.17
Trdmt1O55055 Gm28695-201ENSMUST00000190300 697 ntBASIC14.01□□□□□ -0.17
Trdmt1O55055 Gm37448-201ENSMUST00000192795 697 ntBASIC14.01□□□□□ -0.17
Trdmt1O55055 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC14.01□□□□□ -0.17
Trdmt1O55055 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC14.01□□□□□ -0.17
Trdmt1O55055 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trdmt1O55055 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC14.01□□□□□ -0.17
Trdmt1O55055 AC131330.1-201ENSMUST00000227814 1015 ntBASIC14.01□□□□□ -0.17
Trdmt1O55055 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdmt1O55055 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdmt1O55055 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trdmt1O55055 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.01□□□□□ -0.17
Trdmt1O55055 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trdmt1O55055 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
Trdmt1O55055 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.01□□□□□ -0.17
Trdmt1O55055 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trdmt1O55055 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trdmt1O55055 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdmt1O55055 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdmt1O55055 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trdmt1O55055 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trdmt1O55055 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Trdmt1O55055 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdmt1O55055 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms