Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
BckdkO55028 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.87□□□□□ -0.51
BckdkO55028 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
BckdkO55028 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
BckdkO55028 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
BckdkO55028 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
BckdkO55028 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
BckdkO55028 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.87□□□□□ -0.51
BckdkO55028 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.87□□□□□ -0.51
BckdkO55028 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
BckdkO55028 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
BckdkO55028 Gm37497-201ENSMUST00000195830 798 ntBASIC11.87□□□□□ -0.51
BckdkO55028 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.87□□□□□ -0.51
BckdkO55028 Gm6013-201ENSMUST00000212264 699 ntBASIC11.87□□□□□ -0.51
BckdkO55028 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
BckdkO55028 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
BckdkO55028 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
BckdkO55028 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
BckdkO55028 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
BckdkO55028 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
BckdkO55028 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
BckdkO55028 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
BckdkO55028 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
BckdkO55028 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
BckdkO55028 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
BckdkO55028 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
BckdkO55028 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
BckdkO55028 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
BckdkO55028 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
BckdkO55028 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
BckdkO55028 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
BckdkO55028 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
BckdkO55028 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.86□□□□□ -0.51
BckdkO55028 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
BckdkO55028 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.86□□□□□ -0.51
BckdkO55028 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
BckdkO55028 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
BckdkO55028 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
BckdkO55028 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
BckdkO55028 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
BckdkO55028 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
BckdkO55028 Pck2-205ENSMUST00000226352 2784 ntBASIC11.86□□□□□ -0.51
BckdkO55028 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
BckdkO55028 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
BckdkO55028 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
BckdkO55028 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
BckdkO55028 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
BckdkO55028 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
BckdkO55028 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.86□□□□□ -0.51
BckdkO55028 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
BckdkO55028 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.86□□□□□ -0.51
BckdkO55028 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
BckdkO55028 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.86□□□□□ -0.51
BckdkO55028 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
BckdkO55028 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.86□□□□□ -0.51
BckdkO55028 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
BckdkO55028 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
BckdkO55028 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.86□□□□□ -0.51
BckdkO55028 Gm27682-201ENSMUST00000183930 110 ntBASIC11.86□□□□□ -0.51
BckdkO55028 Mir6420-201ENSMUST00000185032 102 ntBASIC11.86□□□□□ -0.51
BckdkO55028 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.86□□□□□ -0.51
BckdkO55028 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.86□□□□□ -0.51
BckdkO55028 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.86□□□□□ -0.51
BckdkO55028 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.86□□□□□ -0.51
BckdkO55028 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.86□□□□□ -0.51
BckdkO55028 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.86□□□□□ -0.51
BckdkO55028 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
BckdkO55028 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.86□□□□□ -0.51
BckdkO55028 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
BckdkO55028 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
BckdkO55028 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.86□□□□□ -0.51
BckdkO55028 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
BckdkO55028 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.86□□□□□ -0.51
BckdkO55028 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.86□□□□□ -0.51
BckdkO55028 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
BckdkO55028 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
BckdkO55028 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
BckdkO55028 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
BckdkO55028 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
BckdkO55028 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
BckdkO55028 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
BckdkO55028 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.86□□□□□ -0.51
BckdkO55028 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
BckdkO55028 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
BckdkO55028 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
BckdkO55028 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
BckdkO55028 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
BckdkO55028 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
BckdkO55028 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
BckdkO55028 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
BckdkO55028 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
BckdkO55028 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.85□□□□□ -0.51
BckdkO55028 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
BckdkO55028 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
BckdkO55028 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
BckdkO55028 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
BckdkO55028 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.85□□□□□ -0.51
BckdkO55028 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
BckdkO55028 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
BckdkO55028 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms