Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ChkaO54804 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ChkaO54804 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.91□□□□□ -0.34
ChkaO54804 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ChkaO54804 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ChkaO54804 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ChkaO54804 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ChkaO54804 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.91□□□□□ -0.34
ChkaO54804 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ChkaO54804 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.91□□□□□ -0.34
ChkaO54804 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.91□□□□□ -0.34
ChkaO54804 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.91□□□□□ -0.34
ChkaO54804 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ChkaO54804 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
ChkaO54804 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ChkaO54804 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ChkaO54804 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ChkaO54804 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ChkaO54804 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ChkaO54804 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
ChkaO54804 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ChkaO54804 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ChkaO54804 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ChkaO54804 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ChkaO54804 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
ChkaO54804 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ChkaO54804 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ChkaO54804 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ChkaO54804 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.91□□□□□ -0.34
ChkaO54804 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
ChkaO54804 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
ChkaO54804 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ChkaO54804 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
ChkaO54804 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ChkaO54804 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
ChkaO54804 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ChkaO54804 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ChkaO54804 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ChkaO54804 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ChkaO54804 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ChkaO54804 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.9□□□□□ -0.34
ChkaO54804 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.9□□□□□ -0.34
ChkaO54804 Gm11803-201ENSMUST00000119966 444 ntBASIC12.9□□□□□ -0.34
ChkaO54804 Gm10156-201ENSMUST00000122364 462 ntBASIC12.9□□□□□ -0.34
ChkaO54804 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ChkaO54804 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ChkaO54804 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ChkaO54804 Gm8810-201ENSMUST00000172895 754 ntBASIC12.9□□□□□ -0.34
ChkaO54804 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.9□□□□□ -0.34
ChkaO54804 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ChkaO54804 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.9□□□□□ -0.34
ChkaO54804 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ChkaO54804 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.9□□□□□ -0.34
ChkaO54804 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ChkaO54804 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
ChkaO54804 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.9□□□□□ -0.34
ChkaO54804 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ChkaO54804 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ChkaO54804 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ChkaO54804 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ChkaO54804 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ChkaO54804 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ChkaO54804 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ChkaO54804 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ChkaO54804 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ChkaO54804 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ChkaO54804 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ChkaO54804 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ChkaO54804 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
ChkaO54804 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.89□□□□□ -0.35
ChkaO54804 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.89□□□□□ -0.35
ChkaO54804 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ChkaO54804 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.89□□□□□ -0.35
ChkaO54804 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ChkaO54804 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ChkaO54804 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ChkaO54804 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ChkaO54804 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
ChkaO54804 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.89□□□□□ -0.35
ChkaO54804 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ChkaO54804 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.89□□□□□ -0.35
ChkaO54804 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.89□□□□□ -0.35
ChkaO54804 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.89□□□□□ -0.35
ChkaO54804 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ChkaO54804 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
ChkaO54804 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ChkaO54804 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ChkaO54804 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.89□□□□□ -0.35
ChkaO54804 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ChkaO54804 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ChkaO54804 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.89□□□□□ -0.35
ChkaO54804 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.89□□□□□ -0.35
ChkaO54804 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.89□□□□□ -0.35
ChkaO54804 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.89□□□□□ -0.35
ChkaO54804 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.89□□□□□ -0.35
ChkaO54804 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.89□□□□□ -0.35
ChkaO54804 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.89□□□□□ -0.35
ChkaO54804 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ChkaO54804 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ChkaO54804 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms