Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ptch2O35595 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ptch2O35595 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.12□□□□□ -0.31
Ptch2O35595 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.12□□□□□ -0.31
Ptch2O35595 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ptch2O35595 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ptch2O35595 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ptch2O35595 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ptch2O35595 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ptch2O35595 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptch2O35595 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ptch2O35595 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptch2O35595 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptch2O35595 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ptch2O35595 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptch2O35595 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptch2O35595 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptch2O35595 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptch2O35595 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.11□□□□□ -0.31
Ptch2O35595 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptch2O35595 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ptch2O35595 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptch2O35595 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.11□□□□□ -0.31
Ptch2O35595 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.11□□□□□ -0.31
Ptch2O35595 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptch2O35595 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.11□□□□□ -0.31
Ptch2O35595 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ptch2O35595 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ptch2O35595 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Ptch2O35595 Gm16505-201ENSMUST00000179981 232 ntBASIC13.11□□□□□ -0.31
Ptch2O35595 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ptch2O35595 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.11□□□□□ -0.31
Ptch2O35595 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ptch2O35595 Gm44967-201ENSMUST00000207047 631 ntBASIC13.11□□□□□ -0.31
Ptch2O35595 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.11□□□□□ -0.31
Ptch2O35595 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.11□□□□□ -0.31
Ptch2O35595 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.11□□□□□ -0.31
Ptch2O35595 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ptch2O35595 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptch2O35595 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ptch2O35595 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.11□□□□□ -0.31
Ptch2O35595 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ptch2O35595 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptch2O35595 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ptch2O35595 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.11□□□□□ -0.31
Ptch2O35595 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptch2O35595 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ptch2O35595 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptch2O35595 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptch2O35595 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptch2O35595 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ptch2O35595 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptch2O35595 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptch2O35595 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptch2O35595 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptch2O35595 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptch2O35595 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.1□□□□□ -0.31
Ptch2O35595 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptch2O35595 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptch2O35595 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptch2O35595 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptch2O35595 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ptch2O35595 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptch2O35595 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptch2O35595 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ptch2O35595 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptch2O35595 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ptch2O35595 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptch2O35595 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptch2O35595 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptch2O35595 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.1□□□□□ -0.31
Ptch2O35595 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ptch2O35595 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.1□□□□□ -0.31
Ptch2O35595 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Ptch2O35595 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.1□□□□□ -0.31
Ptch2O35595 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.1□□□□□ -0.31
Ptch2O35595 Gm5904-201ENSMUST00000210286 865 ntBASIC13.1□□□□□ -0.31
Ptch2O35595 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.1□□□□□ -0.31
Ptch2O35595 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptch2O35595 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptch2O35595 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptch2O35595 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptch2O35595 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptch2O35595 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptch2O35595 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ptch2O35595 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptch2O35595 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.1□□□□□ -0.31
Ptch2O35595 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptch2O35595 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptch2O35595 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.1□□□□□ -0.31
Ptch2O35595 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ptch2O35595 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.1□□□□□ -0.31
Ptch2O35595 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptch2O35595 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptch2O35595 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptch2O35595 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.1□□□□□ -0.31
Ptch2O35595 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptch2O35595 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.1□□□□□ -0.31
Ptch2O35595 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptch2O35595 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms