Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Gm9630-201ENSMUST00000178304 885 ntBASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.08□□□□□ -0.31
Pcdh9F8VPK8 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdh9F8VPK8 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdh9F8VPK8 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdh9F8VPK8 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdh9F8VPK8 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.08□□□□□ -0.32
Pcdh9F8VPK8 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh9F8VPK8 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Pcdh9F8VPK8 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh9F8VPK8 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh9F8VPK8 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh9F8VPK8 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.08□□□□□ -0.32
Pcdh9F8VPK8 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh9F8VPK8 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh9F8VPK8 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Pcdh9F8VPK8 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Pcdh9F8VPK8 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh9F8VPK8 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh9F8VPK8 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh9F8VPK8 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh9F8VPK8 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh9F8VPK8 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh9F8VPK8 Proscos-202ENSMUST00000178990 666 ntBASIC13.08□□□□□ -0.32
Pcdh9F8VPK8 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.08□□□□□ -0.32
Pcdh9F8VPK8 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.08□□□□□ -0.32
Pcdh9F8VPK8 Gm38671-201ENSMUST00000200573 130 ntBASIC13.08□□□□□ -0.32
Pcdh9F8VPK8 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.08□□□□□ -0.32
Pcdh9F8VPK8 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.08□□□□□ -0.32
Pcdh9F8VPK8 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.08□□□□□ -0.32
Pcdh9F8VPK8 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh9F8VPK8 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh9F8VPK8 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh9F8VPK8 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Pcdh9F8VPK8 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh9F8VPK8 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh9F8VPK8 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Pcdh9F8VPK8 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh9F8VPK8 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh9F8VPK8 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Pcdh9F8VPK8 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Pcdh9F8VPK8 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh9F8VPK8 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh9F8VPK8 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh9F8VPK8 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 Gm8213-201ENSMUST00000118191 441 ntBASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms