Protein–RNA interactions for Protein: F6U473

Gm28305, Predicted gene 28305 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28305F6U473 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Gm28305F6U473 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Gm28305F6U473 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Gm28305F6U473 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Gm28305F6U473 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC9.3□□□□□ -0.92
Gm28305F6U473 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Gm28305F6U473 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Gm28305F6U473 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Gm28305F6U473 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Gm28305F6U473 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Gm28305F6U473 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Gm28305F6U473 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC9.3□□□□□ -0.92
Gm28305F6U473 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Gm28305F6U473 AC126257.2-201ENSMUST00000215507 2300 ntBASIC9.3□□□□□ -0.92
Gm28305F6U473 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC9.29□□□□□ -0.92
Gm28305F6U473 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Gm28305F6U473 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Gm28305F6U473 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC9.29□□□□□ -0.92
Gm28305F6U473 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Gm28305F6U473 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Gm28305F6U473 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Gm28305F6U473 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
Gm28305F6U473 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Gm28305F6U473 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Gm28305F6U473 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Gm28305F6U473 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Gm28305F6U473 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC9.29□□□□□ -0.92
Gm28305F6U473 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Gm28305F6U473 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Gm28305F6U473 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Gm28305F6U473 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC9.29□□□□□ -0.92
Gm28305F6U473 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Gm28305F6U473 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Gm28305F6U473 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Gm28305F6U473 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Gm28305F6U473 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Gm28305F6U473 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Gm28305F6U473 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Gm28305F6U473 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC9.29□□□□□ -0.92
Gm28305F6U473 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC9.29□□□□□ -0.92
Gm28305F6U473 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
Gm28305F6U473 Gm25927-201ENSMUST00000175058 117 ntBASIC9.29□□□□□ -0.92
Gm28305F6U473 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC9.29□□□□□ -0.92
Gm28305F6U473 Gm43073-201ENSMUST00000198200 1189 ntBASIC9.29□□□□□ -0.92
Gm28305F6U473 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Gm28305F6U473 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC9.29□□□□□ -0.92
Gm28305F6U473 Otx2os1-206ENSMUST00000228153 787 ntBASIC9.29□□□□□ -0.92
Gm28305F6U473 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Gm28305F6U473 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Gm28305F6U473 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Gm28305F6U473 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC9.29□□□□□ -0.92
Gm28305F6U473 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Gm28305F6U473 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Gm28305F6U473 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Gm28305F6U473 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Gm28305F6U473 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Gm28305F6U473 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Gm28305F6U473 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Gm28305F6U473 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Gm28305F6U473 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Gm28305F6U473 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Gm28305F6U473 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC9.29□□□□□ -0.92
Gm28305F6U473 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Gm28305F6U473 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Gm28305F6U473 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Gm28305F6U473 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Gm28305F6U473 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Gm28305F6U473 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Gm28305F6U473 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Gm28305F6U473 Gm43860-201ENSMUST00000201742 2705 ntBASIC9.29□□□□□ -0.92
Gm28305F6U473 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Gm28305F6U473 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Gm28305F6U473 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Gm28305F6U473 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC9.29□□□□□ -0.92
Gm28305F6U473 Gm37437-201ENSMUST00000194451 1937 ntBASIC9.29□□□□□ -0.92
Gm28305F6U473 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Gm28305F6U473 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Gm28305F6U473 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Gm28305F6U473 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Gm28305F6U473 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Gm28305F6U473 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Gm28305F6U473 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm28305F6U473 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm28305F6U473 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm28305F6U473 Gm36957-201ENSMUST00000192982 2824 ntBASIC9.28□□□□□ -0.92
Gm28305F6U473 AC122840.1-201ENSMUST00000220915 3334 ntBASIC9.28□□□□□ -0.92
Gm28305F6U473 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm28305F6U473 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC9.28□□□□□ -0.92
Gm28305F6U473 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC9.28□□□□□ -0.92
Gm28305F6U473 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm28305F6U473 Gm45532-201ENSMUST00000210342 3620 ntBASIC9.28□□□□□ -0.92
Gm28305F6U473 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm28305F6U473 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Gm28305F6U473 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm28305F6U473 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm28305F6U473 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Gm28305F6U473 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm28305F6U473 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Gm28305F6U473 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm28305F6U473 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC9.28□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms