Protein–RNA interactions for Protein: F6RGI3

Gm340, Predicted gene 340, mousemouse

Predictions only

Length 1,242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm340F6RGI3 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm340F6RGI3 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm340F6RGI3 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.43□□□□□ -0.42
Gm340F6RGI3 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm340F6RGI3 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm340F6RGI3 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm340F6RGI3 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm340F6RGI3 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm340F6RGI3 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Gm340F6RGI3 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Gm340F6RGI3 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm340F6RGI3 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm340F6RGI3 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Gm340F6RGI3 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm340F6RGI3 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm340F6RGI3 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm340F6RGI3 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Gm340F6RGI3 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.42□□□□□ -0.42
Gm340F6RGI3 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm340F6RGI3 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm340F6RGI3 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.42□□□□□ -0.42
Gm340F6RGI3 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Gm340F6RGI3 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.42□□□□□ -0.42
Gm340F6RGI3 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Gm340F6RGI3 Gm11978-201ENSMUST00000122315 466 ntBASIC12.42□□□□□ -0.42
Gm340F6RGI3 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm340F6RGI3 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.42□□□□□ -0.42
Gm340F6RGI3 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm340F6RGI3 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.42□□□□□ -0.42
Gm340F6RGI3 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.42□□□□□ -0.42
Gm340F6RGI3 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.42□□□□□ -0.42
Gm340F6RGI3 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Gm340F6RGI3 Gm17794-201ENSMUST00000220252 955 ntBASIC12.42□□□□□ -0.42
Gm340F6RGI3 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.42□□□□□ -0.42
Gm340F6RGI3 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Gm340F6RGI3 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm340F6RGI3 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Gm340F6RGI3 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm340F6RGI3 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm340F6RGI3 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm340F6RGI3 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm340F6RGI3 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm340F6RGI3 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm340F6RGI3 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Gm340F6RGI3 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm340F6RGI3 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm340F6RGI3 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm340F6RGI3 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.41□□□□□ -0.42
Gm340F6RGI3 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm340F6RGI3 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.41□□□□□ -0.42
Gm340F6RGI3 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Gm11814-201ENSMUST00000119515 929 ntBASIC12.41□□□□□ -0.42
Gm340F6RGI3 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Gm24196-201ENSMUST00000179161 110 ntBASIC12.41□□□□□ -0.42
Gm340F6RGI3 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.41□□□□□ -0.42
Gm340F6RGI3 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.41□□□□□ -0.42
Gm340F6RGI3 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.41□□□□□ -0.42
Gm340F6RGI3 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.41□□□□□ -0.42
Gm340F6RGI3 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm340F6RGI3 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms