Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Gm8228-201ENSMUST00000189949 2192 ntBASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 AC131068.2-201ENSMUST00000226175 1453 ntBASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Gm18584-201ENSMUST00000203098 964 ntBASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 AC166349.1-201ENSMUST00000220866 695 ntBASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cpsf4lE9Q2N0 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 Gm12502-201ENSMUST00000120197 444 ntBASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 Gm3890-201ENSMUST00000182416 207 ntBASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 Gm5370-201ENSMUST00000187187 574 ntBASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 Gm9728-201ENSMUST00000200197 1055 ntBASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms