Protein–RNA interactions for Protein: E9PX29

Sptbn4, Spectrin beta chain, mousemouse

Predictions only

Length 2,561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4E9PX29 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sptbn4E9PX29 Gm22594-201ENSMUST00000104251 130 ntBASIC11.4□□□□□ -0.58
Sptbn4E9PX29 Gm23596-201ENSMUST00000104304 132 ntBASIC11.4□□□□□ -0.58
Sptbn4E9PX29 Gm12030-201ENSMUST00000121917 223 ntBASIC11.4□□□□□ -0.58
Sptbn4E9PX29 Rprl1-201ENSMUST00000158050 327 ntBASIC11.4□□□□□ -0.58
Sptbn4E9PX29 Gm23045-201ENSMUST00000175041 96 ntBASIC11.4□□□□□ -0.58
Sptbn4E9PX29 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.4□□□□□ -0.58
Sptbn4E9PX29 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.4□□□□□ -0.58
Sptbn4E9PX29 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sptbn4E9PX29 n-R5s211-201ENSMUST00000093689 119 ntBASIC11.4□□□□□ -0.58
Sptbn4E9PX29 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sptbn4E9PX29 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sptbn4E9PX29 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sptbn4E9PX29 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sptbn4E9PX29 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sptbn4E9PX29 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.4□□□□□ -0.58
Sptbn4E9PX29 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sptbn4E9PX29 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.4□□□□□ -0.58
Sptbn4E9PX29 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sptbn4E9PX29 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sptbn4E9PX29 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sptbn4E9PX29 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Sptbn4E9PX29 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.4□□□□□ -0.58
Sptbn4E9PX29 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sptbn4E9PX29 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sptbn4E9PX29 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sptbn4E9PX29 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Sptbn4E9PX29 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sptbn4E9PX29 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Sptbn4E9PX29 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sptbn4E9PX29 Gm24248-201ENSMUST00000157321 322 ntBASIC11.4□□□□□ -0.58
Sptbn4E9PX29 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sptbn4E9PX29 Mir6407-201ENSMUST00000184510 101 ntBASIC11.4□□□□□ -0.58
Sptbn4E9PX29 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.4□□□□□ -0.58
Sptbn4E9PX29 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sptbn4E9PX29 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sptbn4E9PX29 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sptbn4E9PX29 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sptbn4E9PX29 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.4□□□□□ -0.58
Sptbn4E9PX29 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sptbn4E9PX29 Gm45133-201ENSMUST00000207548 2773 ntBASIC11.4□□□□□ -0.58
Sptbn4E9PX29 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sptbn4E9PX29 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sptbn4E9PX29 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Sptbn4E9PX29 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sptbn4E9PX29 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Sptbn4E9PX29 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Gm16071-201ENSMUST00000119589 793 ntBASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Gm17826-201ENSMUST00000189720 798 ntBASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC11.39□□□□□ -0.59
Sptbn4E9PX29 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Gm44981-201ENSMUST00000205549 1943 ntBASIC11.39□□□□□ -0.59
Sptbn4E9PX29 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.39□□□□□ -0.59
Sptbn4E9PX29 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sptbn4E9PX29 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms