Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Gm27701-201ENSMUST00000184498 110 ntBASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Gm29608-201ENSMUST00000190444 463 ntBASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Gm44397-201ENSMUST00000195950 113 ntBASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Gm6180-201ENSMUST00000065243 498 ntBASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Gm28043E0CXC2 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Gm28043E0CXC2 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Gm28043E0CXC2 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Gm28043E0CXC2 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Gm28043E0CXC2 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Gm28043E0CXC2 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm28043E0CXC2 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Gm28043E0CXC2 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm28043E0CXC2 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm28043E0CXC2 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gm28043E0CXC2 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm28043E0CXC2 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm28043E0CXC2 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm28043E0CXC2 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.83□□□□□ -0.36
Gm28043E0CXC2 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm28043E0CXC2 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Gm28043E0CXC2 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.83□□□□□ -0.36
Gm28043E0CXC2 Gm14928-201ENSMUST00000120198 477 ntBASIC12.83□□□□□ -0.36
Gm28043E0CXC2 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.83□□□□□ -0.36
Gm28043E0CXC2 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.83□□□□□ -0.36
Gm28043E0CXC2 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.83□□□□□ -0.36
Gm28043E0CXC2 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm28043E0CXC2 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Gm28043E0CXC2 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gm28043E0CXC2 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.83□□□□□ -0.36
Gm28043E0CXC2 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm28043E0CXC2 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Gm28043E0CXC2 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm28043E0CXC2 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Gm28043E0CXC2 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm28043E0CXC2 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm28043E0CXC2 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.83□□□□□ -0.36
Gm28043E0CXC2 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm28043E0CXC2 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm28043E0CXC2 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28043E0CXC2 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28043E0CXC2 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28043E0CXC2 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28043E0CXC2 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28043E0CXC2 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28043E0CXC2 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28043E0CXC2 Gm12091-201ENSMUST00000146791 830 ntBASIC12.82□□□□□ -0.36
Gm28043E0CXC2 Gm15429-201ENSMUST00000151268 798 ntBASIC12.82□□□□□ -0.36
Gm28043E0CXC2 Gm23984-201ENSMUST00000157139 203 ntBASIC12.82□□□□□ -0.36
Gm28043E0CXC2 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28043E0CXC2 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.82□□□□□ -0.36
Gm28043E0CXC2 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Gm28043E0CXC2 Gm2495-201ENSMUST00000191160 466 ntBASIC12.82□□□□□ -0.36
Gm28043E0CXC2 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.82□□□□□ -0.36
Gm28043E0CXC2 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28043E0CXC2 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.82□□□□□ -0.36
Gm28043E0CXC2 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Gm28043E0CXC2 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28043E0CXC2 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28043E0CXC2 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28043E0CXC2 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28043E0CXC2 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28043E0CXC2 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28043E0CXC2 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28043E0CXC2 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28043E0CXC2 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28043E0CXC2 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Gm28043E0CXC2 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.82□□□□□ -0.36
Gm28043E0CXC2 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28043E0CXC2 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28043E0CXC2 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms