Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hfm1D3Z4R1 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hfm1D3Z4R1 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hfm1D3Z4R1 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hfm1D3Z4R1 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC17.64■□□□□ 0.41
Hfm1D3Z4R1 Gm43858-201ENSMUST00000199418 1778 ntBASIC17.64■□□□□ 0.41
Hfm1D3Z4R1 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hfm1D3Z4R1 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hfm1D3Z4R1 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hfm1D3Z4R1 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hfm1D3Z4R1 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hfm1D3Z4R1 Gm43520-201ENSMUST00000197996 164 ntBASIC17.64■□□□□ 0.41
Hfm1D3Z4R1 Gm42629-201ENSMUST00000199063 1102 ntBASIC17.64■□□□□ 0.41
Hfm1D3Z4R1 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hfm1D3Z4R1 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hfm1D3Z4R1 AC154305.4-201ENSMUST00000224520 614 ntBASIC17.64■□□□□ 0.41
Hfm1D3Z4R1 AC174797.2-202ENSMUST00000225729 568 ntBASIC17.64■□□□□ 0.41
Hfm1D3Z4R1 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hfm1D3Z4R1 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Hfm1D3Z4R1 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC17.63■□□□□ 0.41
Hfm1D3Z4R1 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hfm1D3Z4R1 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hfm1D3Z4R1 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hfm1D3Z4R1 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hfm1D3Z4R1 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hfm1D3Z4R1 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hfm1D3Z4R1 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hfm1D3Z4R1 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Hfm1D3Z4R1 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hfm1D3Z4R1 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC17.63■□□□□ 0.41
Hfm1D3Z4R1 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hfm1D3Z4R1 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Hfm1D3Z4R1 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Hfm1D3Z4R1 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Hfm1D3Z4R1 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Hfm1D3Z4R1 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC17.63■□□□□ 0.41
Hfm1D3Z4R1 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hfm1D3Z4R1 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Hfm1D3Z4R1 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Hfm1D3Z4R1 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Hfm1D3Z4R1 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC17.63■□□□□ 0.41
Hfm1D3Z4R1 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC17.63■□□□□ 0.41
Hfm1D3Z4R1 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hfm1D3Z4R1 Gm3028-201ENSMUST00000213805 1119 ntBASIC17.63■□□□□ 0.41
Hfm1D3Z4R1 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hfm1D3Z4R1 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hfm1D3Z4R1 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC17.63■□□□□ 0.41
Hfm1D3Z4R1 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hfm1D3Z4R1 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hfm1D3Z4R1 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hfm1D3Z4R1 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hfm1D3Z4R1 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hfm1D3Z4R1 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hfm1D3Z4R1 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hfm1D3Z4R1 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hfm1D3Z4R1 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Hfm1D3Z4R1 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hfm1D3Z4R1 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hfm1D3Z4R1 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hfm1D3Z4R1 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hfm1D3Z4R1 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hfm1D3Z4R1 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hfm1D3Z4R1 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hfm1D3Z4R1 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hfm1D3Z4R1 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hfm1D3Z4R1 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hfm1D3Z4R1 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hfm1D3Z4R1 Gm25880-201ENSMUST00000104331 132 ntBASIC17.62■□□□□ 0.41
Hfm1D3Z4R1 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC17.62■□□□□ 0.41
Hfm1D3Z4R1 Gm7722-201ENSMUST00000120646 741 ntBASIC17.62■□□□□ 0.41
Hfm1D3Z4R1 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC17.62■□□□□ 0.41
Hfm1D3Z4R1 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC17.62■□□□□ 0.41
Hfm1D3Z4R1 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Hfm1D3Z4R1 Gm28324-201ENSMUST00000187913 264 ntBASIC17.62■□□□□ 0.41
Hfm1D3Z4R1 Gm37028-201ENSMUST00000194276 107 ntBASIC17.62■□□□□ 0.41
Hfm1D3Z4R1 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Hfm1D3Z4R1 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC17.62■□□□□ 0.41
Hfm1D3Z4R1 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hfm1D3Z4R1 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hfm1D3Z4R1 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC17.62■□□□□ 0.41
Hfm1D3Z4R1 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hfm1D3Z4R1 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hfm1D3Z4R1 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hfm1D3Z4R1 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.62■□□□□ 0.41
Hfm1D3Z4R1 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hfm1D3Z4R1 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Hfm1D3Z4R1 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hfm1D3Z4R1 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hfm1D3Z4R1 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hfm1D3Z4R1 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hfm1D3Z4R1 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hfm1D3Z4R1 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hfm1D3Z4R1 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hfm1D3Z4R1 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Hfm1D3Z4R1 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC17.61■□□□□ 0.41
Hfm1D3Z4R1 Gm8617-201ENSMUST00000118796 2222 ntBASIC17.61■□□□□ 0.41
Hfm1D3Z4R1 AC154262.2-201ENSMUST00000224310 2293 ntBASIC17.61■□□□□ 0.41
Hfm1D3Z4R1 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC17.61■□□□□ 0.41
Hfm1D3Z4R1 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hfm1D3Z4R1 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms