Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
Gm12887B1AVM1 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.32□□□□□ -0.76
Gm12887B1AVM1 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Gm6447-201ENSMUST00000118905 835 ntBASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Gm25911-201ENSMUST00000157621 56 ntBASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Gm43703-201ENSMUST00000200523 763 ntBASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 AC159114.1-201ENSMUST00000220349 266 ntBASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Gm12887B1AVM1 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm12887B1AVM1 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm12887B1AVM1 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm12887B1AVM1 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm12887B1AVM1 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm12887B1AVM1 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm12887B1AVM1 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm12887B1AVM1 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Gm12887B1AVM1 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm12887B1AVM1 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Gm12887B1AVM1 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm12887B1AVM1 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm12887B1AVM1 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
Gm12887B1AVM1 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC10.31□□□□□ -0.76
Gm12887B1AVM1 Gm9630-201ENSMUST00000178304 885 ntBASIC10.31□□□□□ -0.76
Gm12887B1AVM1 AC073947.2-201ENSMUST00000215888 1130 ntBASIC10.31□□□□□ -0.76
Gm12887B1AVM1 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Gm12887B1AVM1 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm12887B1AVM1 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm12887B1AVM1 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm12887B1AVM1 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm12887B1AVM1 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Gm12887B1AVM1 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm12887B1AVM1 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm12887B1AVM1 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Gm12887B1AVM1 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm12887B1AVM1 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Gm12887B1AVM1 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm12887B1AVM1 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm12887B1AVM1 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm12887B1AVM1 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Gm12887B1AVM1 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm12887B1AVM1 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Gm12887B1AVM1 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm12887B1AVM1 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm12887B1AVM1 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.31□□□□□ -0.76
Gm12887B1AVM1 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm12887B1AVM1 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms